38261 GRIM-19 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
38261 chr_19a_19 GRIM-19 superfamily 343302 343903 - GRIM-19 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7449920 Thaps38261.1, Thaps38261.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0456

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0031
 0.36

Most Highly Correlated Transcripts

12899

AAA
0.8437

13448

Sec1
0.8362

16295

FBPase
0.8309

41687

(APB1) Adaptin_N
0.8245

bd1652

(bd1652) ABC_ATPase superfamily
0.8239

4022

hypothetical protein
0.8227

35728

FtsZ_type1
0.8188

33126

Rab8_Rab10_Rab13_like
0.8148

264556

FBPase
0.8098

17095

NIF
0.8065

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GRIM-19 superfamily GRIM-19 protein; This family consists of several eukaryotic gene associated with retinoic-... - 112.062 4.33E-32 6 - 138 superfamily 148050

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261771 PHATRDRAFT_28620 PHATRDRAFT_28620 256224 283463 100956 Cre16.g664600.t1.2 AT2G33220.1 287246

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments