41687 (APB1) Adaptin_N
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
41687 chr_9 (APB1) Adaptin_N 258734 261781 + Adaptin_N

Synonyms

NCBI ID Ensembl Genomes exon ID
7449283 Thaps41687.1, Thaps41687.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0443

Most Highly Correlated Transcripts

263997

(APA1) Adaptin_N
0.9087

263994

Adaptin_N
0.9012

bd1893

(bd1893) NA
0.8996

bd463

(bd463) Aa_trans superfamily
0.8989

12836

EEP superfamily
0.894

9036

hypothetical protein
0.8902

12899

AAA
0.8866

22318

hypothetical protein
0.8822

32098

PTZ00063
0.8788

13448

Sec1
0.8723

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
B2-adapt-app_C Beta2-adaptin appendage, C-terminal sub-domain; Members of this family adopt a structure consisting... cl07618 81.1967 7.40E-18 802 - 918 specific 255159
B2-adapt-app_C superfamily Beta2-adaptin appendage, C-terminal sub-domain; Members of this family adopt a structure consisting... - 81.1967 7.40E-18 802 - 918 superfamily 263407
Adaptin_N Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and... - 512.538 8.83E-172 40 - 547 multi-dom 250737

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd1735 PHATRDRAFT_bd1735 165792 66488 448193 Cre11.g478156.t1.1 AT4G23460.1 336750

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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