4007 MDR1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
4007 chr_3 MDR1 2340626 2341874 - MDR1

Synonyms

NCBI ID Ensembl Genomes exon ID
7452760 Thaps4007.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0146

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0161
 0.36

Most Highly Correlated Transcripts

22234

sensory_box
0.9119

bd1841

(bd1841) CAP10 superfamily
0.9103

3922

hypothetical protein
0.8894

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8889

bd1840

(bd1840) NA
0.887

4108

hypothetical protein
0.8836

4168

hypothetical protein
0.8749

29322

AAT_I superfamily
0.8719

bd410

(bd410) HNHc
0.8696

10474

hypothetical protein
0.8667

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family; This... cl16912 185.112 1.84E-54 74 - 410 specific 176228
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 185.112 1.84E-54 74 - 410 superfamily 266485
Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion... - 146.339 4.84E-40 45 - 412 multi-dom 223677

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 271483 315053 Not available Not available AT1G23740.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0016491 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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