40496 EMP70 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40496 chr_4 EMP70 superfamily 2072980 2075451 - EMP70 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451371 Thaps40496.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0397

Most Highly Correlated Transcripts

bd1842

(bd1842) NA
0.908

1197

RhaT
0.9048

2328

hypothetical protein
0.8872

8415

P4Hc
0.8858

25509

hypothetical protein
0.8856

24328

ANK
0.8786

16114

PLN02350
0.8767

25373

hypothetical protein
0.8732

2742

DUF1336 superfamily
0.8726

3310

hypothetical protein
0.8719

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
EMP70 superfamily Endomembrane protein 70; Endomembrane protein 70. - 510.702 7.07E-174 124 - 666 superfamily 251662

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12587 PHATRDRAFT_12587 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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