40817 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
40817 chr_5 hypothetical protein 1756814 1757637 - hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7448201 Thaps40817.2, Thaps40817.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0181

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0054
 0.44

Most Highly Correlated Transcripts

bd1869

(bd1869) SET
0.9103

25040

NA
0.8837

37118

FeThRed_B
0.8798

268257

fabG
0.8741

269624

TIM_phosphate_binding superfamily
0.8714

264556

FBPase
0.866

16295

FBPase
0.8636

270251

(NTT4) hypothetical protein
0.8616

261400

NA
0.8547

10077

SKP1
0.853

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_39090 PHATRDRAFT_39090 206499 328815 358602 Cre12.g543450.t1.2 AT5G20570.1 285454

KEGG

KEGG description KEGG Pathway
Circadian rhythm - mammal map04710

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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