11826 Zip superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11826 chr_22 Zip superfamily 553745 555404 - Zip superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443899 Thaps11826.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0138

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0171
 0.35

Most Highly Correlated Transcripts

4100

hypothetical protein
0.8634

261279

(DGT) PLN03242
0.8559

bd937

(bd937) Chalcone superfamily
0.8558

25495

ALDH_F6_MMSDH
0.8553

29547

(PNP1) PNP_UDP_1 superfamily
0.8539

13021

metallo-dependent_hydrolases superfamily
0.8493

2906

hypothetical protein
0.849

22902

hypothetical protein
0.8487

21411

hypothetical protein
0.8473

8510

hypothetical protein
0.8468

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Zip superfamily ZIP Zinc transporter; The ZIP family consists of zinc transport proteins and many putative metal... - 83.1683 8.71E-18 154 - 289 superfamily 260422

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 193470 232111 Not available AT5G17010.3 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 GO:0030001 GO:0046873 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0030001

metal ion transport

Details: 
The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0046873

metal ion transmembrane transporter activity

Details: 
Catalysis of the transfer of metal ions from one side of a membrane to the other.
GO Category: 
MF

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