42368 (UGDH1) PLN02353
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42368 chr_14 (UGDH1) PLN02353 366268 368585 + PLN02353

Synonyms

NCBI ID Ensembl Genomes exon ID
7451220 Thaps42368.2, Thaps42368.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0009

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0244
 0.36

Most Highly Correlated Transcripts

bd211

(bd211) Maf_Ham1 superfamily
0.9078

38608

SDR_a5
0.9057

36078

PRX5_like
0.8914

14192

PLN02449
0.89

2227

DUF3661
0.8861

bd718

(bd718) PRK10387
0.8846

3435

Rotamase
0.8793

21821

hypothetical protein
0.8757

4888

hypothetical protein
0.8754

38769

PLN00033
0.875

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; The UDP-glucose/GDP-mannose... cl19126 187.826 40 - 226 specific 252123
F420_oxidored superfamily - 187.826 40 - 226 superfamily 267479
UDPG_MGDP_dh superfamily UDP-glucose/GDP-mannose dehydrogenase family, central domain; The UDP-glucose/GDP-mannose... - 138.148 3.09E-39 246 - 343 superfamily 250272
UDPG_MGDP_dh superfamily UDP-glucose/GDP-mannose dehydrogenase family, central domain; The UDP-glucose/GDP-mannose... - 138.148 3.09E-39 246 - 343 superfamily 250272
UDPG_MGDP_dh_C UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; The UDP-glucose/GDP-mannose... cl17747 114.942 365 - 483 specific 252122
UDPG_MGDP_dh_C superfamily UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; The UDP-glucose/GDP-mannose... - 114.942 365 - 483 superfamily 266809
PLN02353 - 910.981 38 - 504 multi-dom 177986

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_18745 PHATRDRAFT_18745 271881 183612 423315 Cre06.g278185.t1.1 AT5G39320.1 336944

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0006118 GO:0003979 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0003979

UDP-glucose 6-dehydrogenase activity

Details: 
Catalysis of the reaction: H(2)O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate.
GO Category: 
MF

Add comment

Log in to post comments