4725 TM_PBP1_branched-chain-AA_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4725	chr_4	TM_PBP1_branched-chain-AA_like superfamily	1754285	1755823	+	TM_PBP1_branched-chain-AA_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451933	Thaps4725.2, Thaps4725.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0170

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9442	3659 hypothetical protein 0.872	11743 hypothetical protein 0.8545	10989 hypothetical protein 0.8116	23350 lectin_L-type 0.8088	2066 hypothetical protein 0.8048
bd1076 (bd1076) NA 0.8031	3321 SMC_prok_B 0.7903	24668 hypothetical protein 0.7866	bd521 (bd521) NA 0.7825

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TM_PBP1_branched-chain-AA_like superfamily		Transmembrane subunit (TM) of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC...	-	79.5788	2.00E-16	49 - 389	superfamily	260432

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	196408	Cre12.g558353.t1.1	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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