23350 lectin_L-type
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23350 chr_7 lectin_L-type 241092 242842 - lectin_L-type

Synonyms

NCBI ID Ensembl Genomes exon ID
7446172 Thaps23350.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0346

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9376

6875

DUF4471 superfamily
0.9229

3321

SMC_prok_B
0.9224

11743

hypothetical protein
0.9062

3659

hypothetical protein
0.8997

4630

hypothetical protein
0.8992

263643

Tub superfamily
0.8785

10989

hypothetical protein
0.867

2066

hypothetical protein
0.8404

7401

hypothetical protein
0.8402

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
lectin_L-type legume lectins; The L-type (legume-type) lectins are a highly diverse family of carbohydrate... cl14058 178.392 2.02E-53 110 - 358 specific 173886
lectin_L-type superfamily legume lectins; The L-type (legume-type) lectins are a highly diverse family of carbohydrate... - 178.392 2.02E-53 110 - 358 superfamily 265423

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 337063

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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