3321 SMC_prok_BThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3321	chr_3	SMC_prok_B	663129	665582	-	SMC_prok_B

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444079	Thaps3321.2, Thaps3321.3, Thaps3321.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0339

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9457	23350 lectin_L-type 0.9224	3659 hypothetical protein 0.8891	4630 hypothetical protein 0.889	11743 hypothetical protein 0.8837	2066 hypothetical protein 0.8649
10989 hypothetical protein 0.8616	7401 hypothetical protein 0.8496	263792 (ubi6r) 0.8444	263643 Tub superfamily 0.8438

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SMC_prok_B		chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of...	-	65.848	3.33E-11	391 - 672	multi-dom	233757

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0008570 -

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