5144 fer2 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5144	chr_5	fer2 superfamily	454962	455942	+	fer2 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451758	Thaps5144.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0200

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0039	0.52	1.1 1.5

Most Highly Correlated Transcripts

4108 hypothetical protein 0.888	36641 Aldolase_Class_I superfamily 0.8795	41530 Cytochrom_C superfamily 0.8787	261278 GRX_GRXh_1_2_like 0.8672	4524 DHQS 0.8654	261823 FIG superfamily 0.8622
36525 PRK09427 0.8568	31751 PKCI_related 0.8564	36007 Aldolase_II superfamily 0.8513	21875 zf-CW 0.8476

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
fer2 superfamily		2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron...	-	86.6973	3.58E-21	228 - 324	superfamily	260226

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	241121	246410	108137	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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