41530 Cytochrom_C superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
41530	chr_8	Cytochrom_C superfamily	475043	475986	-	Cytochrom_C superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450151	Thaps41530.1, Thaps41530.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0049

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0042	0.43

Most Highly Correlated Transcripts

36641 Aldolase_Class_I superfamily 0.9081	4108 hypothetical protein 0.907	268840 CBS_pair_10 0.903	4111 TENA_THI-4 superfamily 0.9027	261287 eIF1_SUI1 0.9024	19826 LSm1 0.9021
37628 Ribosomal_L7Ae 0.8979	31751 PKCI_related 0.8941	42457 (RS25) Ribosomal_S25 0.8939	32173 (RT16) rpsP 0.8939

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cytochrom_C superfamily		Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and...	-	162.72	2.03E-52	1 - 107	superfamily	264358

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_20948	PHATR_20948	272236	237074	431150	Cre12.g522600.t1.2	AT1G22840.1	316376

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 -

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