5600 Thioredoxin_like superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5600	chr_5	Thioredoxin_like superfamily	1613505	1614184	-	Thioredoxin_like superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448170	Thaps5600.1, Thaps5600.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0180	0.31	110000 16

Most Highly Correlated Transcripts

6140 hypothetical protein 0.9126	34514 PLN02539 0.909	21690 hypothetical protein 0.9072	1038 SPRYD7 0.9019	264157 CBS_pair superfamily 0.899	10353 hypothetical protein 0.895
10059 hypothetical protein 0.8939	20405 GRX_GRXh_1_2_like 0.8905	10889 hypothetical protein 0.8897	21722 Aldo_ket_red 0.8865

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	135.876	2.37E-40	50 - 184	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	163475	127749	Not available	Not available	Not available	333948

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 -

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