5653 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5653 chr_5 hypothetical protein 1739673 1741685 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7445211 Thaps5653.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0402

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0065
 0.48

Most Highly Correlated Transcripts

10934

Adenylation_DNA_ligase_like superfamily
0.9155

3676

hypothetical protein
0.9046

5604

hypothetical protein
0.9038

41636

PolY_Pol_IV_kappa
0.8931

4565

hypothetical protein
0.8902

2097

hypothetical protein
0.8877

21220

KU superfamily
0.8874

25509

hypothetical protein
0.8865

bd877

(bd877) NA
0.8821

2660

hypothetical protein
0.8818

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000775 GO:0003677 GO:0005634 -

GO:0000775

chromosome, centromeric region

Details: 
The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome.
GO Category: 
CC

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

Add comment

Log in to post comments