5690 YdcF-like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5690 chr_5 YdcF-like 1833968 1835119 + YdcF-like

Synonyms

NCBI ID Ensembl Genomes exon ID
7445230 Thaps5690.1, Thaps5690.3, Thaps5690.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0244

Most Highly Correlated Transcripts

4108

hypothetical protein
0.8998

31412

NAD_bind_amino_acid_DH superfamily
0.8963

7066

hypothetical protein
0.893

12899

AAA
0.8917

5692

Peptidase_C15 superfamily
0.8889

15114

Zinc_peptidase_like superfamily
0.8886

5797

ThTPase
0.8881

9017

hypothetical protein
0.8871

9912

hypothetical protein
0.8855

1367

nuc_hydro superfamily
0.882

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
YdcF-like YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in... cl00630 68.8795 2.09E-14 33 - 176 specific 99750
YdcF-like superfamily YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in... - 68.8795 2.09E-14 33 - 176 superfamily 260543

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_36423 PHATRDRAFT_36423 194788 177926 450927 Cre13.g606800.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments