15114 Zinc_peptidase_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
15114 chr_4 Zinc_peptidase_like superfamily 461162 462619 + Zinc_peptidase_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447450 Thaps15114.1, Thaps15114.4, Thaps15114.3, Thaps15114.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0242

Most Highly Correlated Transcripts

263111

PTZ00150
0.9221

270120

Uup
0.9197

25456

GH99_GH71_like_2
0.9129

261324

PLN02724
0.912

267979

HCO3_cotransp superfamily
0.9093

268136

COG1054
0.9083

262555

AAT_I superfamily
0.9071

23812

TrmA
0.9056

25142

SWIRM
0.9055

28004

hypothetical protein
0.9044

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Zinc_peptidase_like superfamily Zinc peptidases M18, M20, M28, and M42; Zinc peptidases play vital roles in metabolic and signaling... - 434.785 1.17E-150 2 - 386 superfamily 265470
Peptidase_M20 Peptidase family M20/M25/M40; This family includes a range of zinc metallopeptidases belonging to... - 134.203 5.62E-36 19 - 382 multi-dom 250697

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15083 PHATRDRAFT_15083 181231 178769 Not available Cre06.g271700.t1.1 AT4G38220.1 344735

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0006508 GO:0008237 GO:0004046 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0004046

aminoacylase activity

Details: 
Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid.
GO Category: 
MF

Add comment

Log in to post comments