5698 Rad17
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5698 chr_5 Rad17 1861578 1864611 - Rad17

Synonyms

NCBI ID Ensembl Genomes exon ID
7444866 Thaps5698.3, Thaps5698.2, Thaps5698.4, Thaps5698.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0323

Most Highly Correlated Transcripts

22252

hypothetical protein
0.9277

268049

(ATH1) HA2
0.9133

21190

SAC3_GANP
0.9108

22603

COG3899
0.9068

22620

(Tp_AP2-EREBP1) regulator [Rayko]
0.9057

23269

hypothetical protein
0.9057

25270

hypothetical protein
0.9029

21265

hypothetical protein
0.8993

21891

hypothetical protein
0.8989

24604

hypothetical protein
0.8988

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rad17 Rad17 cell cycle checkpoint protein; Rad17 cell cycle checkpoint protein. - 104.806 1.14E-23 349 - 838 multi-dom 251803

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_33013 PHATRDRAFT_33013 187552 288025 211526 Not available AT5G66130.1 309501

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005663 GO:0006260 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005663

DNA replication factor C complex

Details: 
A complex of five polypeptides in eukaryotes, and two in prokaryotes, that loads the DNA polymerase processivity factor proliferating cell nuclear antigen (PCNA) onto DNA, thereby permitting processive DNA synthesis catalyzed by DNA polymerase.
GO Category: 
CC

GO:0006260

DNA replication

Details: 
The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
GO Category: 
BP

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