5777 PRO8NTThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
5777	chr_5	PRO8NT	2081193	2084514	-	PRO8NT

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442287	Thaps5777.4, Thaps5777.3, Thaps5777.1, Thaps5777.2, Thaps5777.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0260

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0014	0.46	2.6 6.6

Most Highly Correlated Transcripts

5776 PROCN superfamily 0.9465	5779 hypothetical protein 0.9418	6657 hypothetical protein 0.9412	2958 PROCN 0.941	2959 hypothetical protein 0.938	992 hypothetical protein 0.9274
262826 DUF3608 superfamily 0.927	9910 Peptidase_C19 superfamily 0.9268	2941 hypothetical protein 0.9241	2942 hypothetical protein 0.9221

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PRO8NT superfamily		PRO8NT (NUC069), PrP8 N-terminal domain; The PRO8NT domain is found at the N-terminus of pre-mRNA...	-	287.292	8.81E-91	532 - 696	superfamily	149261
PRO8NT superfamily		PRO8NT (NUC069), PrP8 N-terminal domain; The PRO8NT domain is found at the N-terminus of pre-mRNA...	-	287.292	8.81E-91	532 - 696	superfamily	149261

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004842 -

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