5996 N2227 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
5996 chr_6 N2227 superfamily 432577 433986 + N2227 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451161 Thaps5996.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0133
 0.40

Most Highly Correlated Transcripts

bd1652

(bd1652) ABC_ATPase superfamily
0.9717

bd1403

(bd1403) NA
0.9563

bd208

(bd208) DUF3529
0.9511

bd1306

(bd1306) NA
0.9495

bd1863

(bd1863) NA
0.9395

bd1380

(bd1380) ycf39
0.9361

bd1387

(bd1387) psbE
0.9334

bd1304

(bd1304) Ycf4
0.9318

bd1342

(bd1342) psaL
0.9274

bd1820

(bd1820) Fasciclin
0.9228

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
N2227 superfamily N2227-like protein; This family features sequences that are similar to a region of hypothetical... - 115.495 1.81E-29 172 - 404 superfamily 254530

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments