Organism : Geobacter sulfurreducens | Module List :
Regulation information for GSU1597(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for GSU1597
|Gene||Common Name||Description||Module membership|
|GSU0552||GSU0552||conserved domain protein (NCBI)||17, 129|
|GSU0561||GSU0561||conserved domain protein (NCBI)||17, 254|
|GSU0563||GSU0563||hypothetical protein (VIMSS)||17, 330|
|GSU0564||GSU0564||conserved hypothetical protein (VIMSS)||17, 330|
|GSU0663||pth||peptidyl-tRNA hydrolase (NCBI)||17, 161|
|GSU1511||GSU1511||glycosyl transferase, group 1 family protein (NCBI)||17, 254|
|GSU1582||bioA||adenosylmethionine--8-amino-7-oxononanoate aminotransferase (VIMSS)||120, 280|
|GSU1583||bioD||dethiobiotin synthase (NCBI)||120, 248|
|GSU1584||bioB||biotin synthetase (Dmitry Rodionov)||120, 315|
|GSU1585||GSU1585||conserved hypothetical protein (VIMSS)||120, 248|
|GSU1586||nusA||N utilization substance protein A (NCBI)||120, 248|
|GSU1587||GSU1587||ribosomal protein L7Ae family protein (NCBI)||120, 248|
|GSU1588||infB||translation initiation factor IF-2 (NCBI)||120, 248|
|GSU1589||rbfA||ribosome-binding factor A (NCBI)||120, 248|
|GSU1590||GSU1590||DHH family/DHHA1 domain protein (NCBI)||17, 120|
|GSU1591||truB||tRNA pseudouridine synthase B (NCBI)||120, 248|
|GSU1592||rpsO||ribosomal protein S15 (NCBI)||120, 248|
|GSU1593||pnp||polyribonucleotide nucleotidyltransferase (NCBI)||120, 248|
|GSU1594||GSU1594||peptidase, M16 family (VIMSS)||17, 120|
|GSU1596||GSU1596||Sua5/YciO/YrdC/YwlC family protein (VIMSS)||17, 120|
|GSU1597||GSU1597||hypothetical protein (VIMSS)||17, 120|
|GSU1655||GSU1655||sensory box histidine kinase/response regulator (VIMSS)||17, 158|
|GSU1656||GSU1656||sensory box/response regulator (VIMSS)||17, 114|
|GSU1771||GSU1771||conserved domain protein (NCBI)||17, 170|
|GSU1781||GSU1781||hypothetical protein (VIMSS)||17, 18|
|GSU1782||GSU1782||conserved domain protein (NCBI)||17, 254|
|GSU1783||GSU1783||type IV pilus biogenesis protein PilB, putative (VIMSS)||17, 158|
|GSU1784||GSU1784||type IV pilus biogenesis protein PilC, putative (VIMSS)||17, 18|
|GSU1789||GSU1789||glycosyl transferase, group 2 family protein (VIMSS)||17, 33|
|GSU1850||GSU1850||hypothetical protein (VIMSS)||17, 42|
|GSU1851||GSU1851||glycosyl transferase, group 1 family protein (VIMSS)||17, 333|
|GSU1852||GSU1852||membrane protein, putative (VIMSS)||17, 274|
|GSU1925||GSU1925||transport-associated domain protein (NCBI)||120, 248|
|GSU1926||GSU1926||conserved hypothetical protein (VIMSS)||60, 120|
|GSU2610||GSU2610||LysM domain protein (NCBI)||17, 330|
|GSU2625||GSU2625||transcriptional regulator, ArsR family (NCBI)||120, 248|
|GSU2694||GSU2694||hypothetical protein (VIMSS)||17, 147|
|GSU2868||nusG||transcription antitermination protein NusG (NCBI)||17, 161|
|GSU3079||GSU3079||hypothetical protein (VIMSS)||17, 207|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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