PITA_151 megaCluster: 3 Residual: 0.13

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_151 3 0.13 15 0 0.964199 0
Displaying 1 - 18 of 18
100434 solute carrier family 44, member 1

Details for RP23-20E10.4 - solute carrier family 44, member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100434

Tuberculist Genomic Region

108058 calcium/calmodulin-dependent protein kinase II, delta

Details for - - calcium/calmodulin-dependent protein kinase II, delta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108058

Tuberculist Genomic Region

12363 caspase 4, apoptosis-related cysteine peptidase

Details for - - caspase 4, apoptosis-related cysteine peptidase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12363

Tuberculist Genomic Region

16181 interleukin 1 receptor antagonist

Details for RP23-218B17.2 - interleukin 1 receptor antagonist

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16181

Tuberculist Genomic Region

16402 integrin alpha 5 (fibronectin receptor alpha)

Details for - - integrin alpha 5 (fibronectin receptor alpha)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16402

Tuberculist Genomic Region

20442 ST3 beta-galactoside alpha-2,3-sialyltransferase 1

Details for - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20442

Tuberculist Genomic Region

20482 SKI-like

Details for - - SKI-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20482

Tuberculist Genomic Region

21353 TRAF family member-associated Nf-kappa B activator

Details for RP23-1O11.1 - TRAF family member-associated Nf-kappa B activator

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21353

Tuberculist Genomic Region

80910 G protein-coupled receptor 84

Details for - - G protein-coupled receptor 84

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80910

Tuberculist Genomic Region

12874 carboxypeptidase D

Details for RP23-396O3.1 - carboxypeptidase D

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12874

Tuberculist Genomic Region

16365 immunoresponsive gene 1

Details for - - immunoresponsive gene 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16365

Tuberculist Genomic Region

16449 jagged 1

Details for RP23-173O12.3 - jagged 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16449

Tuberculist Genomic Region

18788 serine (or cysteine) peptidase inhibitor, clade B, member 2

Details for - - serine (or cysteine) peptidase inhibitor, clade B, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18788

Tuberculist Genomic Region

231713 N(alpha)-acetyltransferase 25, NatB auxiliary subunit

Details for - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231713

Tuberculist Genomic Region

60533 CD274 antigen

Details for - - CD274 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60533

Tuberculist Genomic Region

67712 solute carrier family 25, member 37

Details for - - solute carrier family 25, member 37

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67712

Tuberculist Genomic Region

74645 family with sequence similarity 46, member C

Details for DN-384L23.3 - family with sequence similarity 46, member C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74645

Tuberculist Genomic Region

80719 immunoglobulin superfamily, member 6

Details for - - immunoglobulin superfamily, member 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80719

Tuberculist Genomic Region

TFs percTargets pValue
V_IRF3_05_M02767 0.388889 0.000012
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.019 TTTNTWTTYTTT NA 55 YTCCTTTCTNM NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.94 TCCGGC NA 1.16 CCGGCCTC NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.65 TCGTGA NA NA 0.86 GATGTANN NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
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