PITA_29 megaCluster: 4 Residual: 0.28

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_29 4 0.28 15 0 0.868025 0

Members

Displaying 1 - 71 of 71
100040260 predicted pseudogene 1862

Details for - - predicted pseudogene 1862

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100040260

Tuberculist Genomic Region

100040823 ribosomal protein L35 pseudogene

Details for - - ribosomal protein L35 pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100040823

Tuberculist Genomic Region

105722 anoctamin 6

Details for - - anoctamin 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 105722

Tuberculist Genomic Region

11813 apolipoprotein C-II

Details for - - apolipoprotein C-II

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11813

Tuberculist Genomic Region

12504 CD4 antigen

Details for - - CD4 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12504

Tuberculist Genomic Region

12864 cytochrome c oxidase subunit VIc

Details for - - cytochrome c oxidase subunit VIc

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12864

Tuberculist Genomic Region

14109 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)

Details for - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14109

Tuberculist Genomic Region

15370 nuclear receptor subfamily 4, group A, member 1

Details for - - nuclear receptor subfamily 4, group A, member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15370

Tuberculist Genomic Region

15387 heterogeneous nuclear ribonucleoprotein K

Details for - - heterogeneous nuclear ribonucleoprotein K

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15387

Tuberculist Genomic Region

16410 integrin alpha V

Details for RP23-111F12.3 - integrin alpha V

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16410

Tuberculist Genomic Region

192195 ash1 (absent, small, or homeotic)-like (Drosophila)

Details for - - ash1 (absent, small, or homeotic)-like (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 192195

Tuberculist Genomic Region

19821 ring finger protein 2

Details for - - ring finger protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19821

Tuberculist Genomic Region

216783 olfactory receptor 320

Details for RP23-128D9.8 - olfactory receptor 320

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216783

Tuberculist Genomic Region

21748 telomerase RNA component

Details for - - telomerase RNA component

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21748

Tuberculist Genomic Region

227522 ribonuclease P/MRP 38 subunit

Details for RP23-167G19.2 - ribonuclease P/MRP 38 subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227522

Tuberculist Genomic Region

258265 olfactory receptor 1333

Details for - - olfactory receptor 1333

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258265

Tuberculist Genomic Region

258565 olfactory receptor 1009

Details for RP23-16D18.13-001 - olfactory receptor 1009

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258565

Tuberculist Genomic Region

27212 small nucleolar RNA, C/D box 35B

Details for - - small nucleolar RNA, C/D box 35B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27212

Tuberculist Genomic Region

27355 phosphatase domain containing, paladin 1

Details for - - phosphatase domain containing, paladin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27355

Tuberculist Genomic Region

331401 THO complex 2

Details for RP23-300D2.1 - THO complex 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 331401

Tuberculist Genomic Region

434394 ribosomal protein L36 pseudogene

Details for - - ribosomal protein L36 pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 434394

Tuberculist Genomic Region

434782 predicted pseudogene 5637

Details for - - predicted pseudogene 5637

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 434782

Tuberculist Genomic Region

664608 reproductive homeobox 4G

Details for - - reproductive homeobox 4G

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 664608

Tuberculist Genomic Region

666737 RIKEN cDNA 4632427E13 gene

Details for - - RIKEN cDNA 4632427E13 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 666737

Tuberculist Genomic Region

667281 histocompatibility 60b

Details for - - histocompatibility 60b

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 667281

Tuberculist Genomic Region

67149 Na+/K+ transporting ATPase interacting 1

Details for - - Na+/K+ transporting ATPase interacting 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67149

Tuberculist Genomic Region

78943 endoplasmic reticulum (ER) to nucleus signalling 1

Details for RP23-418O11.11-001 - endoplasmic reticulum (ER) to nucleus signalling 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78943

Tuberculist Genomic Region

791293 predicted gene 9948

Details for - - predicted gene 9948

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 791293

Tuberculist Genomic Region

83925 trichorhinophalangeal syndrome I (human)

Details for - - trichorhinophalangeal syndrome I (human)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83925

Tuberculist Genomic Region

93691 Kruppel-like factor 7 (ubiquitous)

Details for RP23-23D16.1 - Kruppel-like factor 7 (ubiquitous)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 93691

Tuberculist Genomic Region

100041859 ribosomal protein L29 pseudogene

Details for - - ribosomal protein L29 pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100041859

Tuberculist Genomic Region

100504377 predicted gene, 20199

Details for - - predicted gene, 20199

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504377

Tuberculist Genomic Region

15937 immediate early response 3

Details for - - immediate early response 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15937

Tuberculist Genomic Region

20602 nuclear receptor co-repressor 2

Details for - - nuclear receptor co-repressor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20602

Tuberculist Genomic Region

26896 mediator complex subunit 14

Details for RP24-392J24.6 - mediator complex subunit 14

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26896

Tuberculist Genomic Region

328365 zinc finger, MIZ-type containing 1

Details for - - zinc finger, MIZ-type containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 328365

Tuberculist Genomic Region

100034251 WAP four-disulfide core domain 17

Details for RP23-430I21.1 - WAP four-disulfide core domain 17

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100034251

Tuberculist Genomic Region

107513 signal sequence receptor, alpha

Details for - - signal sequence receptor, alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107513

Tuberculist Genomic Region

12042 B cell leukemia/lymphoma 10

Details for - - B cell leukemia/lymphoma 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12042

Tuberculist Genomic Region

12642 cholesterol 25-hydroxylase

Details for - - cholesterol 25-hydroxylase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12642

Tuberculist Genomic Region

12914 CREB binding protein

Details for - - CREB binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12914

Tuberculist Genomic Region

13000 casein kinase 2, alpha prime polypeptide

Details for - - casein kinase 2, alpha prime polypeptide

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13000

Tuberculist Genomic Region

13653 early growth response 1

Details for - - early growth response 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13653

Tuberculist Genomic Region

13713 ELK3, member of ETS oncogene family

Details for - - ELK3, member of ETS oncogene family

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13713

Tuberculist Genomic Region

140780 BMP2 inducible kinase

Details for - - BMP2 inducible kinase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 140780

Tuberculist Genomic Region

15902 inhibitor of DNA binding 2

Details for - - inhibitor of DNA binding 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15902

Tuberculist Genomic Region

18036 nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta

Details for - - nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, beta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18036

Tuberculist Genomic Region

18689 per-hexamer repeat gene 4

Details for - - per-hexamer repeat gene 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18689

Tuberculist Genomic Region

18788 serine (or cysteine) peptidase inhibitor, clade B, member 2

Details for - - serine (or cysteine) peptidase inhibitor, clade B, member 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18788

Tuberculist Genomic Region

192657 elongation factor RNA polymerase II 2

Details for - - elongation factor RNA polymerase II 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 192657

Tuberculist Genomic Region

21353 TRAF family member-associated Nf-kappa B activator

Details for RP23-1O11.1 - TRAF family member-associated Nf-kappa B activator

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21353

Tuberculist Genomic Region

231633 transmembrane protein 119

Details for - - transmembrane protein 119

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231633

Tuberculist Genomic Region

231713 N(alpha)-acetyltransferase 25, NatB auxiliary subunit

Details for - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231713

Tuberculist Genomic Region

244895 pseudopodium-enriched atypical kinase 1

Details for - - pseudopodium-enriched atypical kinase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 244895

Tuberculist Genomic Region

641340 nuclear receptor binding factor 2

Details for - - nuclear receptor binding factor 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 641340

Tuberculist Genomic Region

69597 AFG3(ATPase family gene 3)-like 2 (yeast)

Details for - - AFG3(ATPase family gene 3)-like 2 (yeast)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69597

Tuberculist Genomic Region

71844 nucleoporin like 1

Details for - - nucleoporin like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71844

Tuberculist Genomic Region

74277 cysteine-rich hydrophobic domain 2

Details for - - cysteine-rich hydrophobic domain 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74277

Tuberculist Genomic Region

93736 AF4/FMR2 family, member 4

Details for RP23-226J16.7 - AF4/FMR2 family, member 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 93736

Tuberculist Genomic Region

15959 interferon-induced protein with tetratricopeptide repeats 3

Details for - - interferon-induced protein with tetratricopeptide repeats 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15959

Tuberculist Genomic Region

16365 immunoresponsive gene 1

Details for - - immunoresponsive gene 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16365

Tuberculist Genomic Region

16449 jagged 1

Details for RP23-173O12.3 - jagged 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16449

Tuberculist Genomic Region

170625 sorting nexin 18

Details for - - sorting nexin 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170625

Tuberculist Genomic Region

17342 microphthalmia-associated transcription factor

Details for - - microphthalmia-associated transcription factor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17342

Tuberculist Genomic Region

18578 phosphodiesterase 4B, cAMP specific

Details for RP23-57D24.1 - phosphodiesterase 4B, cAMP specific

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18578

Tuberculist Genomic Region

18787 serine (or cysteine) peptidase inhibitor, clade E, member 1

Details for - - serine (or cysteine) peptidase inhibitor, clade E, member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18787

Tuberculist Genomic Region

19271 protein tyrosine phosphatase, receptor type, J

Details for RP24-113P16.2 - protein tyrosine phosphatase, receptor type, J

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19271

Tuberculist Genomic Region

791405 predicted gene 10002

Details for - - predicted gene 10002

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 791405

Tuberculist Genomic Region

80719 immunoglobulin superfamily, member 6

Details for - - immunoglobulin superfamily, member 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80719

Tuberculist Genomic Region

100434 solute carrier family 44, member 1

Details for RP23-20E10.4 - solute carrier family 44, member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100434

Tuberculist Genomic Region

68427 solute carrier family 39 (metal ion transporter), member 13

Details for RP23-263H8.2 - solute carrier family 39 (metal ion transporter), member 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68427

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_AP2ALPHA_01_M00469, TFAP2A_MA0003.1 0.696429, 0.696429 0.00000298

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
9.7e-20 AAAAAAAAAAAA NA 57 TATNAATATTAA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1 CGCCGA NA 1.02 NCGCGCGG Zfp161.1, Zfp161.2, E2F3.1, E2F2.1

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.51 CGTACG NA NA 0.61 ACGTGCCG NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-291b-5p, mmu-miR-291a-5p 0.659574 0.00000384

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-291a-5p 0.4 0.0000258

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