TargetScan_159 megaCluster: 11 Residual: 0.27

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_159 11 0.27 15 0 0.864482 0
Displaying 1 - 46 of 46
13723 predicted gene, 19941

Details for - - predicted gene, 19941

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100503883

Tuberculist Genomic Region

13849 embigin

Details for - - embigin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13723

Tuberculist Genomic Region

14423 epoxide hydrolase 1, microsomal

Details for - - epoxide hydrolase 1, microsomal

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13849

Tuberculist Genomic Region

320204 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1

Details for - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14423

Tuberculist Genomic Region

56358 methyltransferase like 20

Details for RP23-355N5.5 - methyltransferase like 20

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320204

Tuberculist Genomic Region

63959 coatomer protein complex, subunit zeta 2

Details for RP23-353J21.4 - coatomer protein complex, subunit zeta 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56358

Tuberculist Genomic Region

64209 solute carrier family 29 (nucleoside transporters), member 1

Details for - - solute carrier family 29 (nucleoside transporters), member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 63959

Tuberculist Genomic Region

66234 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

Details for - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 64209

Tuberculist Genomic Region

66471 sterol-C4-methyl oxidase-like

Details for - - sterol-C4-methyl oxidase-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66234

Tuberculist Genomic Region

67511 acidic (leucine-rich) nuclear phosphoprotein 32 family, member E

Details for - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66471

Tuberculist Genomic Region

71862 transmembrane emp24 protein transport domain containing 9

Details for - - transmembrane emp24 protein transport domain containing 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67511

Tuberculist Genomic Region

72391 G protein-coupled receptor 160

Details for - - G protein-coupled receptor 160

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71862

Tuberculist Genomic Region

76846 cyclin-dependent kinase inhibitor 3

Details for - - cyclin-dependent kinase inhibitor 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72391

Tuberculist Genomic Region

105988 ribosomal protein S9

Details for - - ribosomal protein S9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76846

Tuberculist Genomic Region

108797 extra spindle pole bodies 1 (S. cerevisiae)

Details for - - extra spindle pole bodies 1 (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 105988

Tuberculist Genomic Region

11363 mex3 homolog B (C. elegans)

Details for - - mex3 homolog B (C. elegans)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108797

Tuberculist Genomic Region

11689 acyl-Coenzyme A dehydrogenase, long-chain

Details for AC124389.2 - acyl-Coenzyme A dehydrogenase, long-chain

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11363

Tuberculist Genomic Region

12578 arachidonate 5-lipoxygenase

Details for - - arachidonate 5-lipoxygenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11689

Tuberculist Genomic Region

12628 cyclin-dependent kinase inhibitor 2A

Details for RP23-166I8.5 - cyclin-dependent kinase inhibitor 2A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12578

Tuberculist Genomic Region

14132 complement component factor h

Details for - - complement component factor h

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12628

Tuberculist Genomic Region

192156 Fc receptor, IgG, alpha chain transporter

Details for - - Fc receptor, IgG, alpha chain transporter

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14132

Tuberculist Genomic Region

19301 mevalonate (diphospho) decarboxylase

Details for - - mevalonate (diphospho) decarboxylase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 192156

Tuberculist Genomic Region

20322 peroxisomal membrane protein 2

Details for - - peroxisomal membrane protein 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19301

Tuberculist Genomic Region

20637 sorbitol dehydrogenase

Details for RP23-173H17.1 - sorbitol dehydrogenase

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20322

Tuberculist Genomic Region

218581 small nuclear ribonucleoprotein 70 (U1)

Details for - - small nuclear ribonucleoprotein 70 (U1)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20637

Tuberculist Genomic Region

22381 DEP domain containing 1B

Details for - - DEP domain containing 1B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 218581

Tuberculist Genomic Region

226849 WW domain binding protein 5

Details for RP23-105O4.3 - WW domain binding protein 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22381

Tuberculist Genomic Region

230316 protein phosphatase 2, regulatory subunit B', alpha

Details for - - protein phosphatase 2, regulatory subunit B', alpha

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226849

Tuberculist Genomic Region

231070 multiple EGF-like-domains 9

Details for - - multiple EGF-like-domains 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230316

Tuberculist Genomic Region

240055 insulin induced gene 1

Details for - - insulin induced gene 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231070

Tuberculist Genomic Region

27055 neuralized homolog 1b (Drosophila)

Details for - - neuralized homolog 1b (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 240055

Tuberculist Genomic Region

494448 FK506 binding protein 9

Details for - - FK506 binding protein 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27055

Tuberculist Genomic Region

56464 chromobox 6

Details for - - chromobox 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 494448

Tuberculist Genomic Region

66286 cathepsin F

Details for - - cathepsin F

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56464

Tuberculist Genomic Region

66514 SEC11 homolog C (S. cerevisiae)

Details for - - SEC11 homolog C (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66286

Tuberculist Genomic Region

67103 asparaginase like 1

Details for - - asparaginase like 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66514

Tuberculist Genomic Region

72119 prostaglandin reductase 1

Details for RP23-211P15.3 - prostaglandin reductase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67103

Tuberculist Genomic Region

109212 TPX2, microtubule-associated protein homolog (Xenopus laevis)

Details for RP23-414F8.1 - TPX2, microtubule-associated protein homolog (Xenopus laevis)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72119

Tuberculist Genomic Region

74470 family with sequence similarity 64, member A

Details for RP23-207N15.1 - family with sequence similarity 64, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 109212

Tuberculist Genomic Region

21335 centrosomal protein 72

Details for - - centrosomal protein 72

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74470

Tuberculist Genomic Region

70385 transforming, acidic coiled-coil containing protein 3

Details for - - transforming, acidic coiled-coil containing protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21335

Tuberculist Genomic Region

75317 spindle apparatus coiled-coil protein 1

Details for RP23-329D21.1 - spindle apparatus coiled-coil protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70385

Tuberculist Genomic Region

108000 PARP1 binding protein

Details for - - PARP1 binding protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75317

Tuberculist Genomic Region

230098 centromere protein F

Details for - - centromere protein F

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108000

Tuberculist Genomic Region

27360 Rho guanine nucleotide exchange factor (GEF) 39

Details for RP23-195K8.7 - Rho guanine nucleotide exchange factor (GEF) 39

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 230098

Tuberculist Genomic Region

Details for - - adducin 3 (gamma)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 27360

Tuberculist Genomic Region

TFs percTargets pValue
NFYA_MA0060.1 0.466667 0.00000295
Displaying 1 - 1 of 1
GO Terms
NA
Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.21 GTCGCG Zfp161.2, Max.2 1.26 CGCGNGGC NA
Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.54 CGATCG NA NA 0.57 CGTGNNAC NA NA

3p UTR PITA

miRNAs percTargets pValue
NA
miRNAs percTargets pValue
NA
Log in or register to post comments