TargetScan_68 megaCluster: 11 Residual: 0.19

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_68 11 0.19 15 0 0.933374 0

Members

Displaying 1 - 52 of 52
103080 septin 10

Details for - - septin 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 103080

Tuberculist Genomic Region

13191 dynactin 1

Details for - - dynactin 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13191

Tuberculist Genomic Region

18518 immunoglobulin (CD79A) binding protein 1

Details for - - immunoglobulin (CD79A) binding protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18518

Tuberculist Genomic Region

216618 coiled-coil domain containing 104

Details for RP23-393O10.2 - coiled-coil domain containing 104

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 216618

Tuberculist Genomic Region

22183 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1

Details for RP23-242C19.4 - zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22183

Tuberculist Genomic Region

22278 upstream transcription factor 1

Details for - - upstream transcription factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 22278

Tuberculist Genomic Region

233870 Tu translation elongation factor, mitochondrial

Details for - - Tu translation elongation factor, mitochondrial

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 233870

Tuberculist Genomic Region

23971 3'-phosphoadenosine 5'-phosphosulfate synthase 1

Details for - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 23971

Tuberculist Genomic Region

52432 protein phosphatase 2, regulatory subunit B, delta

Details for - - protein phosphatase 2, regulatory subunit B, delta

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52432

Tuberculist Genomic Region

54208 ADP-ribosylation factor-like 6 interacting protein 1

Details for - - ADP-ribosylation factor-like 6 interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 54208

Tuberculist Genomic Region

56338 thioredoxin interacting protein

Details for - - thioredoxin interacting protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56338

Tuberculist Genomic Region

56354 DnaJ (Hsp40) homolog, subfamily C, member 7

Details for RP23-390D17.1 - DnaJ (Hsp40) homolog, subfamily C, member 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56354

Tuberculist Genomic Region

664994 isochorismatase domain containing 2a

Details for - - isochorismatase domain containing 2a

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 664994

Tuberculist Genomic Region

667803 RIKEN cDNA C920025E04 gene

Details for - - RIKEN cDNA C920025E04 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 667803

Tuberculist Genomic Region

68735 mitochondrial ribosomal protein S18C

Details for - - mitochondrial ribosomal protein S18C

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68735

Tuberculist Genomic Region

68776 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Details for RP24-258K7.3 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68776

Tuberculist Genomic Region

72354 tetratricopeptide repeat domain 4

Details for RP23-97O7.5 - tetratricopeptide repeat domain 4

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 72354

Tuberculist Genomic Region

74359 RIKEN cDNA 4931414P19 gene

Details for - - RIKEN cDNA 4931414P19 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74359

Tuberculist Genomic Region

78733 trophinin associated protein

Details for - - trophinin associated protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 78733

Tuberculist Genomic Region

80283 ankyrin repeat and BTB (POZ) domain containing 1

Details for - - ankyrin repeat and BTB (POZ) domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80283

Tuberculist Genomic Region

85308 ER membrane protein complex subunit 9

Details for - - ER membrane protein complex subunit 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 85308

Tuberculist Genomic Region

14562 growth differentiation factor 3

Details for - - growth differentiation factor 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14562

Tuberculist Genomic Region

171580 microtubule associated monooxygenase, calponin and LIM domain containing 1

Details for - - microtubule associated monooxygenase, calponin and LIM domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 171580

Tuberculist Genomic Region

257633 acyl-CoA synthetase family member 3

Details for - - acyl-CoA synthetase family member 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 257633

Tuberculist Genomic Region

66537 proteasome maturation protein

Details for - - proteasome maturation protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66537

Tuberculist Genomic Region

67903 GIPC PDZ domain containing family, member 1

Details for - - GIPC PDZ domain containing family, member 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67903

Tuberculist Genomic Region

68328 RAB13, member RAS oncogene family

Details for - - RAB13, member RAS oncogene family

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68328

Tuberculist Genomic Region

75957 Mir17 host gene 1 (non-protein coding)

Details for - - Mir17 host gene 1 (non-protein coding)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75957

Tuberculist Genomic Region

80515 chromodomain helicase DNA binding protein 3, opposite strand

Details for MNCb-2875 - chromodomain helicase DNA binding protein 3, opposite strand

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80515

Tuberculist Genomic Region

99889 ADP-ribosylation factor interacting protein 1

Details for - - ADP-ribosylation factor interacting protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 99889

Tuberculist Genomic Region

107197 expressed sequence AI462493

Details for - - expressed sequence AI462493

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 107197

Tuberculist Genomic Region

19769 Ras-like without CAAX 1

Details for - - Ras-like without CAAX 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19769

Tuberculist Genomic Region

20409 osteoclast stimulating factor 1

Details for - - osteoclast stimulating factor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20409

Tuberculist Genomic Region

213742 inactive X specific transcripts

Details for - - inactive X specific transcripts

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 213742

Tuberculist Genomic Region

227753 gelsolin

Details for RP23-186B18.2 - gelsolin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227753

Tuberculist Genomic Region

26399 mitogen-activated protein kinase kinase 6

Details for RP23-162E10.1 - mitogen-activated protein kinase kinase 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 26399

Tuberculist Genomic Region

317717 SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

Details for - - SEC22 vesicle trafficking protein homolog A (S. cerevisiae)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 317717

Tuberculist Genomic Region

319322 splicing factor 3b, subunit 2

Details for - - splicing factor 3b, subunit 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 319322

Tuberculist Genomic Region

52683 non-SMC condensin II complex, subunit H2

Details for - - non-SMC condensin II complex, subunit H2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52683

Tuberculist Genomic Region

52713 coiled-coil domain containing 59

Details for - - coiled-coil domain containing 59

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 52713

Tuberculist Genomic Region

66526 transcription elongation factor A (SII) N-terminal and central domain containing 2

Details for - - transcription elongation factor A (SII) N-terminal and central domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66526

Tuberculist Genomic Region

66983 zinc finger protein 830

Details for RP23-316C11.5 - zinc finger protein 830

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66983

Tuberculist Genomic Region

67151 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9

Details for - - proteasome (prosome, macropain) 26S subunit, non-ATPase, 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67151

Tuberculist Genomic Region

67707 mitochondrial ribosomal protein L24

Details for - - mitochondrial ribosomal protein L24

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 67707

Tuberculist Genomic Region

68832 RIKEN cDNA 1110057K04 gene

Details for - - RIKEN cDNA 1110057K04 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 68832

Tuberculist Genomic Region

69125 CCR4-NOT transcription complex, subunit 8

Details for RP23-293I3.1 - CCR4-NOT transcription complex, subunit 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69125

Tuberculist Genomic Region

69163 mitochondrial ribosomal protein L44

Details for - - mitochondrial ribosomal protein L44

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 69163

Tuberculist Genomic Region

70385 spindle apparatus coiled-coil protein 1

Details for RP23-329D21.1 - spindle apparatus coiled-coil protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70385

Tuberculist Genomic Region

70415 RIKEN cDNA 2610018G03 gene

Details for RP23-245F8.1 - RIKEN cDNA 2610018G03 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70415

Tuberculist Genomic Region

80280 CDK5 regulatory subunit associated protein 3

Details for RP23-353J21.7 - CDK5 regulatory subunit associated protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80280

Tuberculist Genomic Region

70536 glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

Details for - - glutaminyl-peptide cyclotransferase (glutaminyl cyclase)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 70536

Tuberculist Genomic Region

80286 tumor suppressor candidate 3

Details for - - tumor suppressor candidate 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 80286

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
Ehf.3 0.367347 0.0000252

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
0.00000000066 TTAAAANAAAAA NA 0.0092 RANASAAAGNAA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.15 GCGGAC NA 1.1 TCCGCGTC NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.48 GCGCGC NA NA 0.52 NGCCGTGA NA NA

3p UTR PITA

miRNAs percTargets pValue
NA

3p UTR TargetScan

miRNAs percTargets pValue
NA

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