PITA_151 megaCluster: 3 Residual: 0.13 | Macrophage Network Portal

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
PITA_151	3	0.13	15	0	0.964199	0

Members

Displaying 1 - 18 of 18

100434 solute carrier family 44, member 1 Details for RP23-20E10.4 - solute carrier family 44, member 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100434 Tuberculist Genomic Region	108058 calcium/calmodulin-dependent protein kinase II, delta Details for - - calcium/calmodulin-dependent protein kinase II, delta GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108058 Tuberculist Genomic Region
12363 caspase 4, apoptosis-related cysteine peptidase Details for - - caspase 4, apoptosis-related cysteine peptidase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12363 Tuberculist Genomic Region	16181 interleukin 1 receptor antagonist Details for RP23-218B17.2 - interleukin 1 receptor antagonist GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16181 Tuberculist Genomic Region
16402 integrin alpha 5 (fibronectin receptor alpha) Details for - - integrin alpha 5 (fibronectin receptor alpha) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16402 Tuberculist Genomic Region	20442 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 Details for - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20442 Tuberculist Genomic Region
20482 SKI-like Details for - - SKI-like GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20482 Tuberculist Genomic Region	21353 TRAF family member-associated Nf-kappa B activator Details for RP23-1O11.1 - TRAF family member-associated Nf-kappa B activator GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21353 Tuberculist Genomic Region
80910 G protein-coupled receptor 84 Details for - - G protein-coupled receptor 84 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80910 Tuberculist Genomic Region	12874 carboxypeptidase D Details for RP23-396O3.1 - carboxypeptidase D GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12874 Tuberculist Genomic Region
16365 immunoresponsive gene 1 Details for - - immunoresponsive gene 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16365 Tuberculist Genomic Region	16449 jagged 1 Details for RP23-173O12.3 - jagged 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 16449 Tuberculist Genomic Region
18788 serine (or cysteine) peptidase inhibitor, clade B, member 2 Details for - - serine (or cysteine) peptidase inhibitor, clade B, member 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 18788 Tuberculist Genomic Region	231713 N(alpha)-acetyltransferase 25, NatB auxiliary subunit Details for - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 231713 Tuberculist Genomic Region
60533 CD274 antigen Details for - - CD274 antigen GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 60533 Tuberculist Genomic Region	67712 solute carrier family 25, member 37 Details for - - solute carrier family 25, member 37 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67712 Tuberculist Genomic Region
74645 family with sequence similarity 46, member C Details for DN-384L23.3 - family with sequence similarity 46, member C GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74645 Tuberculist Genomic Region	80719 immunoglobulin superfamily, member 6 Details for - - immunoglobulin superfamily, member 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 80719 Tuberculist Genomic Region

TFBS DB TF

TFs	percTargets	pValue
V_IRF3_05_M02767	0.388889	0.000012

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.019	TTTNTWTTYTTT	NA	55	YTCCTTTCTNM	NA

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
0.94	TCCGGC	NA	1.16	CCGGCCTC	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.65	TCGTGA	NA	NA	0.86	GATGTANN	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

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