PITA_209 megaCluster: 3 Residual: 0.31

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
PITA_209 3 0.31 15 0 0.818159 0

Members

Displaying 1 - 69 of 69
100702 guanylate binding protein 6

Details for - - guanylate binding protein 6

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100702

Tuberculist Genomic Region

100038602 predicted gene 10865

Details for - - predicted gene 10865

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100038602

Tuberculist Genomic Region

100041555 ribosomal protein L10, pseudogene 5

Details for - - ribosomal protein L10, pseudogene 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100041555

Tuberculist Genomic Region

100312473 vomeronasal 1 receptor 86

Details for - - vomeronasal 1 receptor 86

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100312473

Tuberculist Genomic Region

14086 predicted gene, 20035

Details for - - predicted gene, 20035

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504054

Tuberculist Genomic Region

14710 fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)

Details for - - fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14086

Tuberculist Genomic Region

15116 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2

Details for RP23-151M22.5 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14710

Tuberculist Genomic Region

16071 hyaluronan synthase1

Details for - - hyaluronan synthase1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 15116

Tuberculist Genomic Region

16819 immunoglobulin kappa constant

Details for - - immunoglobulin kappa constant

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16071

Tuberculist Genomic Region

171249 lipocalin 2

Details for RP23-161B9.11-003 - lipocalin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16819

Tuberculist Genomic Region

171254 vomeronasal 1 receptor 213

Details for RP23-277B9.6 - vomeronasal 1 receptor 213

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 171249

Tuberculist Genomic Region

212772 vomeronasal 1 receptor 198

Details for RP23-124G18.5 - vomeronasal 1 receptor 198

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 171254

Tuberculist Genomic Region

241452 ADP-ribosylation factor-like 14 effector protein

Details for RP23-12N7.2 - ADP-ribosylation factor-like 14 effector protein

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 212772

Tuberculist Genomic Region

258304 dehydrogenase/reductase (SDR family) member 9

Details for RP24-111M20.1 - dehydrogenase/reductase (SDR family) member 9

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 241452

Tuberculist Genomic Region

258681 olfactory receptor 498

Details for - - olfactory receptor 498

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258304

Tuberculist Genomic Region

320247 olfactory receptor 235

Details for - - olfactory receptor 235

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 258681

Tuberculist Genomic Region

331476 RIKEN cDNA C030023E24 gene

Details for - - RIKEN cDNA C030023E24 gene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 320247

Tuberculist Genomic Region

387168 predicted gene 5125

Details for - - predicted gene 5125

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 331476

Tuberculist Genomic Region

56336 microRNA 150

Details for - - microRNA 150

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387168

Tuberculist Genomic Region

58218 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5

Details for RP23-105M23.2 - UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 56336

Tuberculist Genomic Region

626534 triggering receptor expressed on myeloid cells 3

Details for - - triggering receptor expressed on myeloid cells 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 58218

Tuberculist Genomic Region

65963 tubulin, alpha 1C pseudogene

Details for - - tubulin, alpha 1C pseudogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 626534

Tuberculist Genomic Region

66058 transmembrane protein 176B

Details for - - transmembrane protein 176B

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 65963

Tuberculist Genomic Region

664608 transmembrane protein 176A

Details for - - transmembrane protein 176A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66058

Tuberculist Genomic Region

66990 reproductive homeobox 4G

Details for - - reproductive homeobox 4G

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 664608

Tuberculist Genomic Region

723828 transmembrane protein 134

Details for - - transmembrane protein 134

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66990

Tuberculist Genomic Region

74306 microRNA 222

Details for - - microRNA 222

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 723828

Tuberculist Genomic Region

100502793 protease, serine 46

Details for - - protease, serine 46

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 74306

Tuberculist Genomic Region

12370 predicted gene, 19375

Details for - - predicted gene, 19375

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100502793

Tuberculist Genomic Region

13660 caspase 8

Details for - - caspase 8

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 12370

Tuberculist Genomic Region

14011 EH-domain containing 1

Details for - - EH-domain containing 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 13660

Tuberculist Genomic Region

170676 ets variant gene 6 (TEL oncogene)

Details for - - ets variant gene 6 (TEL oncogene)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14011

Tuberculist Genomic Region

19252 paternally expressed 10

Details for - - paternally expressed 10

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 170676

Tuberculist Genomic Region

20853 dual specificity phosphatase 1

Details for - - dual specificity phosphatase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19252

Tuberculist Genomic Region

210106 staufen (RNA binding protein) homolog 1 (Drosophila)

Details for RP23-19L12.1 - staufen (RNA binding protein) homolog 1 (Drosophila)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20853

Tuberculist Genomic Region

21934 PAP associated domain containing 7

Details for - - PAP associated domain containing 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210106

Tuberculist Genomic Region

227449 tumor necrosis factor receptor superfamily, member 11a

Details for - - tumor necrosis factor receptor superfamily, member 11a

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21934

Tuberculist Genomic Region

228994 zinc finger, CCHC domain containing 2

Details for - - zinc finger, CCHC domain containing 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 227449

Tuberculist Genomic Region

24110 YTH domain family 1

Details for RP23-359C15.7 - YTH domain family 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 228994

Tuberculist Genomic Region

269593 ubiquitin specific peptidase 18

Details for - - ubiquitin specific peptidase 18

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 24110

Tuberculist Genomic Region

30935 leucine zipper protein 1

Details for RP23-426N4.1 - leucine zipper protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 269593

Tuberculist Genomic Region

30940 torsin family 3, member A

Details for - - torsin family 3, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 30935

Tuberculist Genomic Region

66205 ubiquitin specific peptidase 25

Details for - - ubiquitin specific peptidase 25

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 30940

Tuberculist Genomic Region

71934 CD302 antigen

Details for RP23-10L17.2 - CD302 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66205

Tuberculist Genomic Region

76199 carbonic anhydrase 13

Details for - - carbonic anhydrase 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 71934

Tuberculist Genomic Region

76338 mediator complex subunit 13-like

Details for - - mediator complex subunit 13-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76199

Tuberculist Genomic Region

83490 RAB2B, member RAS oncogene family

Details for - - RAB2B, member RAS oncogene family

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76338

Tuberculist Genomic Region

100040233 phosphoinositide-3-kinase adaptor protein 1

Details for - - phosphoinositide-3-kinase adaptor protein 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 83490

Tuberculist Genomic Region

108116 predicted gene 10334

Details for - - predicted gene 10334

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100040233

Tuberculist Genomic Region

16181 solute carrier organic anion transporter family, member 3a1

Details for - - solute carrier organic anion transporter family, member 3a1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 108116

Tuberculist Genomic Region

17387 podoplanin

Details for RP23-348F1.2 - podoplanin

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14726

Tuberculist Genomic Region

17874 interleukin 1 receptor antagonist

Details for RP23-218B17.2 - interleukin 1 receptor antagonist

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 16181

Tuberculist Genomic Region

18187 matrix metallopeptidase 14 (membrane-inserted)

Details for - - matrix metallopeptidase 14 (membrane-inserted)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17387

Tuberculist Genomic Region

212943 myeloid differentiation primary response gene 88

Details for - - myeloid differentiation primary response gene 88

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 17874

Tuberculist Genomic Region

226517 neuropilin 2

Details for RP23-149A5.1 - neuropilin 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18187

Tuberculist Genomic Region

243771 family with sequence similarity 46, member A

Details for - - family with sequence similarity 46, member A

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 212943

Tuberculist Genomic Region

387609 Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

Details for - - Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 226517

Tuberculist Genomic Region

66597 poly (ADP-ribose) polymerase family, member 12

Details for - - poly (ADP-ribose) polymerase family, member 12

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 243771

Tuberculist Genomic Region

75560 zinc fingers and homeoboxes 2

Details for - - zinc fingers and homeoboxes 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 387609

Tuberculist Genomic Region

76800 tripartite motif-containing 13

Details for - - tripartite motif-containing 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 66597

Tuberculist Genomic Region

14747 E1A binding protein p400

Details for - - E1A binding protein p400

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 75560

Tuberculist Genomic Region

20393 ubiquitin specific peptidase 42

Details for - - ubiquitin specific peptidase 42

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 76800

Tuberculist Genomic Region

20482 chemokine-like receptor 1

Details for - - chemokine-like receptor 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14747

Tuberculist Genomic Region

20656 serum/glucocorticoid regulated kinase 1

Details for - - serum/glucocorticoid regulated kinase 1

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20393

Tuberculist Genomic Region

20779 SKI-like

Details for - - SKI-like

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20482

Tuberculist Genomic Region

77987 superoxide dismutase 2, mitochondrial

Details for - - superoxide dismutase 2, mitochondrial

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20656

Tuberculist Genomic Region

60533 Rous sarcoma oncogene

Details for RP23-169M4.1 - Rous sarcoma oncogene

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20779

Tuberculist Genomic Region

Details for - - activating signal cointegrator 1 complex subunit 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 77987

Tuberculist Genomic Region

Details for - - CD274 antigen

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 60533

Tuberculist Genomic Region

TFBS DB TF

TFs percTargets pValue
V_ISGF3G_03_M02771 0.230769 0.00000000586

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
9.7 AAAMAAAMAAA NA 67 TTTTNTAATAT NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
0.9 CGGCGA NA 0.9 NNCCGCGC Zfp161.2

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.34 CAATGANN NA NA NA NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-466h, mmu-miR-466j 0.673913 0.00000275

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-466i-5p 0.25 0.0000606

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