TargetScan_159 megaCluster: 11 Residual: 0.27

Summary

Title	Cluster	Residual	Bicluster Conditions	Residual Permutation P-Value	Var. Exp. First PC	Var. Exp. First PC Perm. P-Value
TargetScan_159	11	0.27	15	0	0.864482	0

Members

Displaying 1 - 46 of 46

TFBS DB TF

TFs	percTargets	pValue
NFYA_MA0060.1	0.466667	0.00000295

GO Terms

Displaying 1 - 1 of 1

GO Terms
NA

Upstream MEME Motif

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif2 E-Value	Motif2 Consensus	Motif2 Matches
0.00000000000051	AAANAAAAASAA	NA	0.00003	SCCCCACCCCC	SP1_MA0079.2, Klf4_MA0039.2, V$ZFP281_01_M01597, V$SP4_Q5_M01273, V$SP1_03_M02281, V$UF1H3BETA_Q6_M01068, V$CACBINDINGPROTEIN_Q6_M00720, V$SP1_Q2_01_M00933, V$SP1_02_M01303, V$SP1_Q4_01_M00932, V$SP1_Q6_M00196, V$SP1_Q6_01_M00931, V$ZFP281_04_M02831, V$EKLF_Q5_M01874, V$GKLF_02_M01588, V$CACD_01_M01113, V$MAZR_01_M00491, V$CKROX_Q2_M01175, V$ZNF219_01_M01122, V$SP1SP3_Q4_M01219, V$MAZ_Q6_M00649, V$ZBP89_Q4_M01816, V$FKLF_Q5_M01837, V$GC_01_M00255, V$KLF7_03_M02773, V$GLI3_Q5_01_M01657, V$MAZ_Q6_01_M02023, V$CACCCBINDINGFACTOR_Q6_M00721, V$EGR1_Q6_M01873, V$SP4_03_M02810, V$EGR1_06_M02744, V$KROX_Q6_M00982, V$EGR2_Q6_M02092, V$ZFP740_03_M02834, V$KLF15_Q2_M01714, V$FPM315_01_M01587, Zfp281.2, Klf7.1, Egr1.1, Sp4.1, Zfp740.1, Bcl6b.2, KLF16_C2H2_DBD_monomeric_11_1, SP3_C2H2_DBD_monomeric_11_1, SP1_C2H2_DBD_monomeric_11_1, ZNF740_C2H2_full_monomeric_10_1, SP8_C2H2_DBD_monomeric_12_1, SP4_C2H2_full_monomeric_17_1

Upstream Weeder Motif

Motif1 Score	Motif1 Consensus	Motif1 Matches	Motif2 Score	Motif2 Consensus	Motif2 Matches
1.21	GTCGCG	Zfp161.2, Max.2	1.26	CGCGNGGC	NA

3p UTR Weeder

Motif1 E-Value	Motif1 Consensus	Motif1 Matches	Motif1 Model	Motif2 E-Value	Motif2 Consensus	Motif2 Matches	Motif2 Model
0.54	CGATCG	NA	NA	0.57	CGTGNNAC	NA	NA

3p UTR PITA

miRNAs	percTargets	pValue
NA

3p UTR TargetScan

miRNAs	percTargets	pValue
NA

13723 predicted gene, 19941 Details for - - predicted gene, 19941 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 100503883 Tuberculist Genomic Region	13849 embigin Details for - - embigin GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13723 Tuberculist Genomic Region
14423 epoxide hydrolase 1, microsomal Details for - - epoxide hydrolase 1, microsomal GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 13849 Tuberculist Genomic Region	320204 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 Details for - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14423 Tuberculist Genomic Region
56358 methyltransferase like 20 Details for RP23-355N5.5 - methyltransferase like 20 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 320204 Tuberculist Genomic Region	63959 coatomer protein complex, subunit zeta 2 Details for RP23-353J21.4 - coatomer protein complex, subunit zeta 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56358 Tuberculist Genomic Region
64209 solute carrier family 29 (nucleoside transporters), member 1 Details for - - solute carrier family 29 (nucleoside transporters), member 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 63959 Tuberculist Genomic Region	66234 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 Details for - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 64209 Tuberculist Genomic Region
66471 sterol-C4-methyl oxidase-like Details for - - sterol-C4-methyl oxidase-like GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66234 Tuberculist Genomic Region	67511 acidic (leucine-rich) nuclear phosphoprotein 32 family, member E Details for - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66471 Tuberculist Genomic Region
71862 transmembrane emp24 protein transport domain containing 9 Details for - - transmembrane emp24 protein transport domain containing 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67511 Tuberculist Genomic Region	72391 G protein-coupled receptor 160 Details for - - G protein-coupled receptor 160 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 71862 Tuberculist Genomic Region
76846 cyclin-dependent kinase inhibitor 3 Details for - - cyclin-dependent kinase inhibitor 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72391 Tuberculist Genomic Region	105988 ribosomal protein S9 Details for - - ribosomal protein S9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 76846 Tuberculist Genomic Region
108797 extra spindle pole bodies 1 (S. cerevisiae) Details for - - extra spindle pole bodies 1 (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 105988 Tuberculist Genomic Region	11363 mex3 homolog B (C. elegans) Details for - - mex3 homolog B (C. elegans) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108797 Tuberculist Genomic Region
11689 acyl-Coenzyme A dehydrogenase, long-chain Details for AC124389.2 - acyl-Coenzyme A dehydrogenase, long-chain GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11363 Tuberculist Genomic Region	12578 arachidonate 5-lipoxygenase Details for - - arachidonate 5-lipoxygenase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 11689 Tuberculist Genomic Region
12628 cyclin-dependent kinase inhibitor 2A Details for RP23-166I8.5 - cyclin-dependent kinase inhibitor 2A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12578 Tuberculist Genomic Region	14132 complement component factor h Details for - - complement component factor h GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 12628 Tuberculist Genomic Region
192156 Fc receptor, IgG, alpha chain transporter Details for - - Fc receptor, IgG, alpha chain transporter GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 14132 Tuberculist Genomic Region	19301 mevalonate (diphospho) decarboxylase Details for - - mevalonate (diphospho) decarboxylase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 192156 Tuberculist Genomic Region
20322 peroxisomal membrane protein 2 Details for - - peroxisomal membrane protein 2 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 19301 Tuberculist Genomic Region	20637 sorbitol dehydrogenase Details for RP23-173H17.1 - sorbitol dehydrogenase GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20322 Tuberculist Genomic Region
218581 small nuclear ribonucleoprotein 70 (U1) Details for - - small nuclear ribonucleoprotein 70 (U1) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 20637 Tuberculist Genomic Region	22381 DEP domain containing 1B Details for - - DEP domain containing 1B GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 218581 Tuberculist Genomic Region
226849 WW domain binding protein 5 Details for RP23-105O4.3 - WW domain binding protein 5 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 22381 Tuberculist Genomic Region	230316 protein phosphatase 2, regulatory subunit B', alpha Details for - - protein phosphatase 2, regulatory subunit B', alpha GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 226849 Tuberculist Genomic Region
231070 multiple EGF-like-domains 9 Details for - - multiple EGF-like-domains 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 230316 Tuberculist Genomic Region	240055 insulin induced gene 1 Details for - - insulin induced gene 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 231070 Tuberculist Genomic Region
27055 neuralized homolog 1b (Drosophila) Details for - - neuralized homolog 1b (Drosophila) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 240055 Tuberculist Genomic Region	494448 FK506 binding protein 9 Details for - - FK506 binding protein 9 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 27055 Tuberculist Genomic Region
56464 chromobox 6 Details for - - chromobox 6 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 494448 Tuberculist Genomic Region	66286 cathepsin F Details for - - cathepsin F GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 56464 Tuberculist Genomic Region
66514 SEC11 homolog C (S. cerevisiae) Details for - - SEC11 homolog C (S. cerevisiae) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66286 Tuberculist Genomic Region	67103 asparaginase like 1 Details for - - asparaginase like 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 66514 Tuberculist Genomic Region
72119 prostaglandin reductase 1 Details for RP23-211P15.3 - prostaglandin reductase 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 67103 Tuberculist Genomic Region	109212 TPX2, microtubule-associated protein homolog (Xenopus laevis) Details for RP23-414F8.1 - TPX2, microtubule-associated protein homolog (Xenopus laevis) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 72119 Tuberculist Genomic Region
74470 family with sequence similarity 64, member A Details for RP23-207N15.1 - family with sequence similarity 64, member A GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 109212 Tuberculist Genomic Region	21335 centrosomal protein 72 Details for - - centrosomal protein 72 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 74470 Tuberculist Genomic Region
70385 transforming, acidic coiled-coil containing protein 3 Details for - - transforming, acidic coiled-coil containing protein 3 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 21335 Tuberculist Genomic Region	75317 spindle apparatus coiled-coil protein 1 Details for RP23-329D21.1 - spindle apparatus coiled-coil protein 1 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 70385 Tuberculist Genomic Region
108000 PARP1 binding protein Details for - - PARP1 binding protein GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 75317 Tuberculist Genomic Region	230098 centromere protein F Details for - - centromere protein F GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 108000 Tuberculist Genomic Region
27360 Rho guanine nucleotide exchange factor (GEF) 39 Details for RP23-195K8.7 - Rho guanine nucleotide exchange factor (GEF) 39 GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 230098 Tuberculist Genomic Region	Details for - - adducin 3 (gamma) GO Terms: NA PATRIC Pathways: [field_patric_pathways] Essentiality: Griffin Essential: [field_griffin_essential] \| In vitro Essential: [field_in_vitro_essential] \| In vivo Essential: [field_in_vivo_essential] Go to Gene Page: 27360 Tuberculist Genomic Region

TargetScan_159 megaCluster: 11 Residual: 0.27

Summary

Members

Details for - - predicted gene, 19941

Details for - - embigin

Details for - - epoxide hydrolase 1, microsomal

Details for - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1

Details for RP23-355N5.5 - methyltransferase like 20

Details for RP23-353J21.4 - coatomer protein complex, subunit zeta 2

Details for - - solute carrier family 29 (nucleoside transporters), member 1

Details for - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1

Details for - - sterol-C4-methyl oxidase-like

Details for - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E

Details for - - transmembrane emp24 protein transport domain containing 9

Details for - - G protein-coupled receptor 160

Details for - - cyclin-dependent kinase inhibitor 3

Details for - - ribosomal protein S9

Details for - - extra spindle pole bodies 1 (S. cerevisiae)

Details for - - mex3 homolog B (C. elegans)

Details for AC124389.2 - acyl-Coenzyme A dehydrogenase, long-chain

Details for - - arachidonate 5-lipoxygenase

Details for RP23-166I8.5 - cyclin-dependent kinase inhibitor 2A

Details for - - complement component factor h

Details for - - Fc receptor, IgG, alpha chain transporter

Details for - - mevalonate (diphospho) decarboxylase

Details for - - peroxisomal membrane protein 2

Details for RP23-173H17.1 - sorbitol dehydrogenase

Details for - - small nuclear ribonucleoprotein 70 (U1)

Details for - - DEP domain containing 1B

Details for RP23-105O4.3 - WW domain binding protein 5

Details for - - protein phosphatase 2, regulatory subunit B', alpha

Details for - - multiple EGF-like-domains 9

Details for - - insulin induced gene 1

Details for - - neuralized homolog 1b (Drosophila)

Details for - - FK506 binding protein 9

Details for - - chromobox 6

Details for - - cathepsin F

Details for - - SEC11 homolog C (S. cerevisiae)

Details for - - asparaginase like 1

Details for RP23-211P15.3 - prostaglandin reductase 1

Details for RP23-414F8.1 - TPX2, microtubule-associated protein homolog (Xenopus laevis)

Details for RP23-207N15.1 - family with sequence similarity 64, member A

Details for - - centrosomal protein 72

Details for - - transforming, acidic coiled-coil containing protein 3

Details for RP23-329D21.1 - spindle apparatus coiled-coil protein 1

Details for - - PARP1 binding protein

Details for - - centromere protein F

Details for RP23-195K8.7 - Rho guanine nucleotide exchange factor (GEF) 39

Details for - - adducin 3 (gamma)

GO Terms

3p UTR PITA