Module 30 Residual: 0.60

Title Bicluster Model Residual Score
bicluster_0030 v02 0.60 -17.77
Displaying 1 - 20 of 20
Rv0238 Transcriptional regulator, TetR family

Details for Rv0238 - Transcriptional regulator, TetR family

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.05 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0238

Tuberculist Genomic Region

Rv1303 ATP synthase protein I

Details for Rv1303 - ATP synthase protein I

GO Terms: GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.22 | In vitro Essential: 0.11 | In vivo Essential: NA

Go to Gene Page: Rv1303

Tuberculist Genomic Region

Rv1304 ATP synthase A chain (EC 3.6.3.14)

Details for Rv1304 - ATP synthase A chain (EC 3.6.3.14)

GO Terms: GO:0046961, GO:0046933, GO:0005886, GO:0005887

PATRIC Pathways: Photosynthesis, Methane metabolism, Oxidative phosphorylation

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: 0.28

Go to Gene Page: Rv1304

Tuberculist Genomic Region

Rv1305 ATP synthase C chain (EC 3.6.3.14)

Details for Rv1305 - ATP synthase C chain (EC 3.6.3.14)

GO Terms: GO:0046933, GO:0046961, GO:0040007

PATRIC Pathways: Oxidative phosphorylation, Methane metabolism, Photosynthesis

Essentiality: Griffin Essential: 0.02 | In vitro Essential: 0.16 | In vivo Essential: NA

Go to Gene Page: Rv1305

Tuberculist Genomic Region

Rv1306 ATP synthase B chain (EC 3.6.3.14)

Details for Rv1306 - ATP synthase B chain (EC 3.6.3.14)

GO Terms: GO:0046961, GO:0046933, GO:0005886, GO:0005887, GO:0040007

PATRIC Pathways: Oxidative phosphorylation, Photosynthesis, Methane metabolism

Essentiality: Griffin Essential: 0.12 | In vitro Essential: 0.03 | In vivo Essential: NA

Go to Gene Page: Rv1306

Tuberculist Genomic Region

Rv1307 ATP synthase B' chain (EC 3.6.3.14) / ATP synthase delta chain (EC 3.6.3.14)

Details for Rv1307 - ATP synthase B' chain (EC 3.6.3.14) / ATP synthase delta chain (EC 3.6.3.14)

GO Terms: GO:0046933, GO:0046961, GO:0005886, GO:0040007

PATRIC Pathways: Methane metabolism, Photosynthesis, Oxidative phosphorylation

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv1307

Tuberculist Genomic Region

Rv1308 ATP synthase alpha chain (EC 3.6.3.14)

Details for Rv1308 - ATP synthase alpha chain (EC 3.6.3.14)

GO Terms: GO:0046961, GO:0046933, GO:0005618, GO:0005886, GO:0040007

PATRIC Pathways: Photosynthesis, Methane metabolism, Oxidative phosphorylation

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.02 | In vivo Essential: NA

Go to Gene Page: Rv1308

Tuberculist Genomic Region

Rv1309 ATP synthase gamma chain (EC 3.6.3.14)

Details for Rv1309 - ATP synthase gamma chain (EC 3.6.3.14)

GO Terms: GO:0046933, GO:0046961, GO:0005618, GO:0005886, GO:0040007

PATRIC Pathways: Photosynthesis, Oxidative phosphorylation, Methane metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv1309

Tuberculist Genomic Region

Rv1310 ATP synthase beta chain (EC 3.6.3.14)

Details for Rv1310 - ATP synthase beta chain (EC 3.6.3.14)

GO Terms: GO:0046961, GO:0046933, GO:0005576, GO:0005618, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Methane metabolism, Oxidative phosphorylation, Photosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.04 | In vivo Essential: NA

Go to Gene Page: Rv1310

Tuberculist Genomic Region

Rv1311 ATP synthase epsilon chain (EC 3.6.3.14)

Details for Rv1311 - ATP synthase epsilon chain (EC 3.6.3.14)

GO Terms: GO:0046961, GO:0046933, GO:0005886, GO:0040007

PATRIC Pathways: Photosynthesis, Oxidative phosphorylation, Methane metabolism

Essentiality: Griffin Essential: 0.22 | In vitro Essential: 0.08 | In vivo Essential: NA

Go to Gene Page: Rv1311

Tuberculist Genomic Region

Rv1312 Possible membrane protein

Details for Rv1312 - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.15 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1312

Tuberculist Genomic Region

Rv1339 Metal-dependent hydrolases of the beta-lactamase superfamily III

Details for Rv1339 - Metal-dependent hydrolases of the beta-lactamase superfamily III

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.15 | In vivo Essential: NA

Go to Gene Page: Rv1339

Tuberculist Genomic Region

Rv1863c Possible membrane protein

Details for Rv1863c - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1863c

Tuberculist Genomic Region

Rv2222c Glutamine synthetase type I (EC 6.3.1.2)

Details for Rv2222c - Glutamine synthetase type I (EC 6.3.1.2)

GO Terms: GO:0004356, GO:0005886, GO:0050001, GO:0051260

PATRIC Pathways: Arginine and proline metabolism, Nitrogen metabolism, Alanine, aspartate and glutamate metabolism

Essentiality: Griffin Essential: 0.15 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2222c

Tuberculist Genomic Region

Rv3050c Transcriptional regulator, TetR family

Details for Rv3050c - Transcriptional regulator, TetR family

GO Terms: GO:0005618

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.40 | In vitro Essential: NA | In vivo Essential: 0.19

Go to Gene Page: Rv3050c

Tuberculist Genomic Region

Rv3677c FIG146518: Zn-dependent hydrolases, including glyoxylases

Details for Rv3677c - FIG146518: Zn-dependent hydrolases, including glyoxylases

GO Terms: GO:0008800

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.95 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3677c

Tuberculist Genomic Region

Rv3678c

Details for Rv3678c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.68 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3678c

Tuberculist Genomic Region

Rv3679 Arsenical pump-driving ATPase (EC 3.6.3.16)

Details for Rv3679 - Arsenical pump-driving ATPase (EC 3.6.3.16)

GO Terms: GO:0015446, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.61 | In vitro Essential: 0.08 | In vivo Essential: NA

Go to Gene Page: Rv3679

Tuberculist Genomic Region

Rv3680 Arsenical pump-driving ATPase (EC 3.6.3.16)

Details for Rv3680 - Arsenical pump-driving ATPase (EC 3.6.3.16)

GO Terms: GO:0015446, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.47 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3680

Tuberculist Genomic Region

Rv3704c Similar to Glutamate--cysteine ligase (EC 6.3.2.2), function unknown

Details for Rv3704c - Similar to Glutamate--cysteine ligase (EC 6.3.2.2), function unknown

GO Terms: GO:0005886

PATRIC Pathways: Glutathione metabolism

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3704c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.052 e-value: 0.81
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
GO:0044710 | GO:0044763 | GO:0009058 | GO:0034641 | GO:0006807 | GO:0044425 single-organism metabolic process | single-organism cellular process | biosynthetic process | cellular nitrogen compound metabolic pro... | nitrogen compound metabolic process | membrane part
Displaying 1 - 14 of 14
GO:0005886 |

plasma membrane

GO:0040007 |

growth

GO:0046961 |

proton-transporting ATPase activity, rotational mechanism

GO:0046933 |

hydrogen ion transporting ATP synthase activity, rotational mechanism

GO:0005887 |

integral to plasma membrane

GO:0005618 |

cell wall

GO:0005576 |

extracellular region

GO:0005829 |

cytosol

GO:0004356 |

glutamate-ammonia ligase activity

GO:0050001 |

D-glutaminase activity

GO:0051260 |

protein homooligomerization

GO:0008800 |

beta-lactamase activity

GO:0015446 |

arsenite-transmembrane transporting ATPase activity