Module 150 Residual: 0.60

Title Bicluster Model Residual Score
bicluster_0150 v02 0.60 -20.72
Displaying 1 - 17 of 17
Rv0112 GDP-mannose 4,6 dehydratase (EC 4.2.1.47)

Details for Rv0112 - GDP-mannose 4,6 dehydratase (EC 4.2.1.47)

GO Terms: GO:0040007

PATRIC Pathways: Amino sugar and nucleotide sugar metabolism, Fructose and mannose metabolism

Essentiality: Griffin Essential: 0.03 | In vitro Essential: 0.09 | In vivo Essential: NA

Go to Gene Page: Rv0112

Tuberculist Genomic Region

Rv0113 Phosphoheptose isomerase (EC 5.3.1.-)

Details for Rv0113 - Phosphoheptose isomerase (EC 5.3.1.-)

GO Terms: GO:0005975, GO:0005529

PATRIC Pathways: Inositol phosphate metabolism, Galactose metabolism, Pentose and glucuronate interconversions, Biosynthesis of ansamycins

Essentiality: Griffin Essential: 0.34 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0113

Tuberculist Genomic Region

Rv0664

Details for Rv0664 -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: 0.53 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0664

Tuberculist Genomic Region

Rv0665

Details for Rv0665 -

GO Terms: GO:0040008

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.47 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0665

Tuberculist Genomic Region

Rv0666

Details for Rv0666 -

GO Terms: GO:0040007

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: 0.09 | In vivo Essential: NA

Go to Gene Page: Rv0666

Tuberculist Genomic Region

Rv0813c DUF1794

Details for Rv0813c - DUF1794

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.97 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0813c

Tuberculist Genomic Region

Rv2551c Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)

Details for Rv2551c - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.39 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2551c

Tuberculist Genomic Region

Rv2552c Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)

Details for Rv2552c - Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)

GO Terms: GO:0004764, GO:0004764, GO:0040007, GO:0042803

PATRIC Pathways: Phenylalanine, tyrosine and tryptophan biosynthesis

Essentiality: Griffin Essential: 0.09 | In vitro Essential: 0.07 | In vivo Essential: NA

Go to Gene Page: Rv2552c

Tuberculist Genomic Region

Rv2554c Putative Holliday junction resolvase (EC 3.1.-.-)

Details for Rv2554c - Putative Holliday junction resolvase (EC 3.1.-.-)

GO Terms: GO:0005829, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.12 | In vitro Essential: 0.03 | In vivo Essential: NA

Go to Gene Page: Rv2554c

Tuberculist Genomic Region

Rv2555c Alanyl-tRNA synthetase (EC 6.1.1.7)

Details for Rv2555c - Alanyl-tRNA synthetase (EC 6.1.1.7)

GO Terms: GO:0004813, GO:0005829, GO:0005886, GO:0040007

PATRIC Pathways: Aminoacyl-tRNA biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.10 | In vivo Essential: NA

Go to Gene Page: Rv2555c

Tuberculist Genomic Region

Rv2805

Details for Rv2805 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.39 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2805

Tuberculist Genomic Region

Rv2806 Possible membrane protein

Details for Rv2806 - Possible membrane protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.87 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2806

Tuberculist Genomic Region

Rv3624c Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)

Details for Rv3624c - Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8)

GO Terms: GO:0004422

PATRIC Pathways: Drug metabolism - other enzymes, Purine metabolism

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3624c

Tuberculist Genomic Region

Rv3625c tRNA(Ile)-lysidine synthetase

Details for Rv3625c - tRNA(Ile)-lysidine synthetase

GO Terms: GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: 0.13 | In vivo Essential: NA

Go to Gene Page: Rv3625c

Tuberculist Genomic Region

Rv3626c

Details for Rv3626c -

GO Terms: GO:0005829

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.50 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3626c

Tuberculist Genomic Region

Rv3627c D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)

Details for Rv3627c - D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)

GO Terms: GO:0009002, GO:0005576, GO:0040007

PATRIC Pathways: Peptidoglycan biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.06 | In vivo Essential: NA

Go to Gene Page: Rv3627c

Tuberculist Genomic Region

Rv3628 Inorganic pyrophosphatase (EC 3.6.1.1)

Details for Rv3628 - Inorganic pyrophosphatase (EC 3.6.1.1)

GO Terms: GO:0004427, GO:0000287, GO:0005829, GO:0005886

PATRIC Pathways: Oxidative phosphorylation

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3628

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.46 e-value: 72
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 15 of 15
GO:0040007 |

growth

GO:0005975 |

carbohydrate metabolic process

GO:0005529 |

NA

GO:0040008 |

regulation of growth

GO:0005886 |

plasma membrane

GO:0004764 |

shikimate 3-dehydrogenase (NADP+) activity

GO:0042803 |

protein homodimerization activity

GO:0005829 |

cytosol

GO:0004813 |

alanine-tRNA ligase activity

GO:0004422 |

hypoxanthine phosphoribosyltransferase activity

GO:0009002 |

serine-type D-Ala-D-Ala carboxypeptidase activity

GO:0005576 |

extracellular region

GO:0004427 |

inorganic diphosphatase activity

GO:0000287 |

magnesium ion binding