Module 299 Residual: 0.50

Title Bicluster Model Residual Score
bicluster_0299 v02 0.50 -17.94
Displaying 1 - 13 of 13
Rv0672 Acyl-CoA dehydrogenase (EC 1.3.99.3)

Details for Rv0672 - Acyl-CoA dehydrogenase (EC 1.3.99.3)

GO Terms: GO:0003995, GO:0005618

PATRIC Pathways: beta-Alanine metabolism, Valine, leucine and isoleucine degradation, Fatty acid metabolism, Propanoate metabolism

Essentiality: Griffin Essential: 0.35 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0672

Tuberculist Genomic Region

Rv0673 Enoyl-CoA hydratase

Details for Rv0673 - Enoyl-CoA hydratase

GO Terms: GO:0005618

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.47 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0673

Tuberculist Genomic Region

Rv0674 Phenylacetic acid degradation operon negative regulatory protein PaaX

Details for Rv0674 - Phenylacetic acid degradation operon negative regulatory protein PaaX

GO Terms: GO:0005576, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.20 | In vitro Essential: 0.13 | In vivo Essential: NA

Go to Gene Page: Rv0674

Tuberculist Genomic Region

Rv1040c PPE family protein

Details for Rv1040c - PPE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.90 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1040c

Tuberculist Genomic Region

Rv3623 Lipoprotein LpqG

Details for Rv3623 - Lipoprotein LpqG

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3623

Tuberculist Genomic Region

Rv3743c Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)

Details for Rv3743c - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3743c

Tuberculist Genomic Region

Rv0675 Enoyl-CoA hydratase (EC 4.2.1.17) Rv1032c Sensor protein basS/pmrB (EC 2.7.3.-)

Details for Rv1032c - Sensor protein basS/pmrB (EC 2.7.3.-)

GO Terms: GO:0004672, GO:0005509, GO:0030145, GO:0046777

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1032c

Tuberculist Genomic Region

Rv1033c DNA-binding response regulator TrcR

Details for Rv1033c - DNA-binding response regulator TrcR

GO Terms: GO:0008150, GO:0008150, GO:0003677, GO:0045892, GO:0045893

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1033c

Tuberculist Genomic Region

Rv1189 putative RNA polymerase sigma factor

Details for Rv1189 - putative RNA polymerase sigma factor

GO Terms: GO:0009409

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.68 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1189

Tuberculist Genomic Region

Rv3621c PPE family protein

Details for Rv3621c - PPE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.97 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3621c

Tuberculist Genomic Region

Rv3622c PE family protein

Details for Rv3622c - PE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.92 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3622c

Tuberculist Genomic Region

Rv3744

Details for Rv3744 -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: 0.98 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3744

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.0000035 e-value: 48
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 15 of 15
GO:0003995 |

acyl-CoA dehydrogenase activity

GO:0005618 |

cell wall

GO:0005576 |

extracellular region

GO:0040007 |

growth

GO:0005886 |

plasma membrane

GO:0004672 |

protein kinase activity

GO:0005509 |

calcium ion binding

GO:0030145 |

manganese ion binding

GO:0046777 |

protein autophosphorylation

GO:0008150 |

biological_process

GO:0003677 |

DNA binding

GO:0045892 |

negative regulation of transcription, DNA-dependent

GO:0045893 |

positive regulation of transcription, DNA-dependent

GO:0009409 |

response to cold