Module 421 Residual: 0.58

Title Bicluster Model Residual Score
bicluster_0421 v02 0.58 -8.78
Displaying 1 - 20 of 20
Rv1009 Cell wall-binding protein

Details for Rv1009 - Cell wall-binding protein

GO Terms: GO:0005515, GO:0005576, GO:0010628, GO:0010629, GO:0040010

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.32 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1009

Tuberculist Genomic Region

Rv1015c LSU ribosomal protein L25p

Details for Rv1015c - LSU ribosomal protein L25p

GO Terms: GO:0005840, GO:0006412, GO:0008097, GO:0005622, GO:0003735, GO:0005829

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1015c

Tuberculist Genomic Region

Rv1194c Regulator of polyketide synthase expression

Details for Rv1194c - Regulator of polyketide synthase expression

GO Terms: GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.70 | In vitro Essential: 0.17 | In vivo Essential: NA

Go to Gene Page: Rv1194c

Tuberculist Genomic Region

Rv1806 PE family protein

Details for Rv1806 - PE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.32 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1806

Tuberculist Genomic Region

Rv1807 PPE family protein

Details for Rv1807 - PPE family protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.49 | In vitro Essential: NA | In vivo Essential: 0.32

Go to Gene Page: Rv1807

Tuberculist Genomic Region

Rv2050

Details for Rv2050 -

GO Terms: GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.08 | In vitro Essential: 0.19 | In vivo Essential: NA

Go to Gene Page: Rv2050

Tuberculist Genomic Region

Rv2714

Details for Rv2714 -

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.88 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2714

Tuberculist Genomic Region

Rv3898c

Details for Rv3898c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.97 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3898c

Tuberculist Genomic Region

Rv0332

Details for Rv0332 -

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0332

Tuberculist Genomic Region

Rv0333

Details for Rv0333 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0333

Tuberculist Genomic Region

Rv0334 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)

Details for Rv0334 - Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)

GO Terms: GO:0008879, GO:0005886, GO:0008879, GO:0019300, GO:0040007

PATRIC Pathways: Polyketide sugar unit biosynthesis, Streptomycin biosynthesis

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.09 | In vivo Essential: NA

Go to Gene Page: Rv0334

Tuberculist Genomic Region

Rv0810c

Details for Rv0810c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.15 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0810c

Tuberculist Genomic Region

Rv0961 PROBABLE INTEGRAL MEMBRANE PROTEIN

Details for Rv0961 - PROBABLE INTEGRAL MEMBRANE PROTEIN

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.36 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0961

Tuberculist Genomic Region

Rv1284 Carbonic anhydrase (EC 4.2.1.1)

Details for Rv1284 - Carbonic anhydrase (EC 4.2.1.1)

GO Terms: GO:0005886, GO:0008270, GO:0040007, GO:0042803

PATRIC Pathways: Nitrogen metabolism

Essentiality: Griffin Essential: 0.83 | In vitro Essential: 0.13 | In vivo Essential: 0.37

Go to Gene Page: Rv1284

Tuberculist Genomic Region

Rv1535 Putative uncharacterized protein BCG_1587

Details for Rv1535 - Putative uncharacterized protein BCG_1587

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.71 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1535

Tuberculist Genomic Region

Rv1636 Universal stress protein UspA and related nucleotide-binding proteins

Details for Rv1636 - Universal stress protein UspA and related nucleotide-binding proteins

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1636

Tuberculist Genomic Region

Rv1637c metallo-beta-lactamase superfamily protein

Details for Rv1637c - metallo-beta-lactamase superfamily protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.97 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1637c

Tuberculist Genomic Region

Rv1805c

Details for Rv1805c -

GO Terms: GO:0005829

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.17 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1805c

Tuberculist Genomic Region

Rv2421c Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)

Details for Rv2421c - Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)

GO Terms: GO:0004515, GO:0040007

PATRIC Pathways: Nicotinate and nicotinamide metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.20 | In vivo Essential: NA

Go to Gene Page: Rv2421c

Tuberculist Genomic Region

Rv3681c WhiB-type transcription regulator

Details for Rv3681c - WhiB-type transcription regulator

GO Terms: GO:0005618, GO:0042803, GO:0047134, GO:0051539

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.87 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3681c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 360 e-value: 130
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 22 of 22
GO:0005515 |

protein binding

GO:0005576 |

extracellular region

GO:0010628 |

positive regulation of gene expression

GO:0010629 |

negative regulation of gene expression

GO:0040010 |

positive regulation of growth rate

GO:0005840 |

ribosome

GO:0006412 |

translation

GO:0008097 |

5S rRNA binding

GO:0005622 |

intracellular

GO:0003735 |

structural constituent of ribosome

GO:0005829 |

cytosol

GO:0005886 |

plasma membrane

GO:0040007 |

growth

GO:0008879 |

glucose-1-phosphate thymidylyltransferase activity

GO:0019300 |

rhamnose biosynthetic process

GO:0008270 |

zinc ion binding

GO:0042803 |

protein homodimerization activity

GO:0004515 |

nicotinate-nucleotide adenylyltransferase activity

GO:0005618 |

cell wall

GO:0047134 |

protein-disulfide reductase activity

GO:0051539 |

4 iron, 4 sulfur cluster binding