Module 547 Residual: 0.53

Title Bicluster Model Residual Score
bicluster_0547 v02 0.53 -12.83
Displaying 1 - 19 of 19
Rv1027c DNA-binding response regulator KdpE

Details for Rv1027c - DNA-binding response regulator KdpE

GO Terms: GO:0008150, GO:0008150, GO:0008150, GO:0008150, GO:0005515, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.17 | In vitro Essential: 0.14 | In vivo Essential: NA

Go to Gene Page: Rv1027c

Tuberculist Genomic Region

Rv1028c Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)

Details for Rv1028c - Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)

GO Terms: GO:0000155, GO:0016020, GO:0006950, GO:0005524, GO:0007165, GO:0005515, GO:0005737, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.59 | In vitro Essential: NA | In vivo Essential: 0.30

Go to Gene Page: Rv1028c

Tuberculist Genomic Region

Rv1029 Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)

Details for Rv1029 - Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1)

GO Terms: GO:0008556

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.59 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1029

Tuberculist Genomic Region

Rv1030 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)

Details for Rv1030 - Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1)

GO Terms: GO:0008556

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.85 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1030

Tuberculist Genomic Region

Rv1031 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)

Details for Rv1031 - Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1)

GO Terms: GO:0008556

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.47 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1031

Tuberculist Genomic Region

Rv2997 Phytoene dehydrogenase and related proteins

Details for Rv2997 - Phytoene dehydrogenase and related proteins

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.66 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2997

Tuberculist Genomic Region

Rv0325

Details for Rv0325 -

GO Terms: GO:0044119

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0325

Tuberculist Genomic Region

Rv0329c

Details for Rv0329c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.68 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0329c

Tuberculist Genomic Region

Rv0585c Possible membrane protein

Details for Rv0585c - Possible membrane protein

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.16 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0585c

Tuberculist Genomic Region

Rv1141c Enoyl-CoA hydratase (EC 4.2.1.17)
Rv1357c Sensory box/GGDEF family protein

Details for Rv1357c - Sensory box/GGDEF family protein

GO Terms: GO:0044119

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1357c

Tuberculist Genomic Region

Rv1553 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

Details for Rv1553 - Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

GO Terms: GO:0000104

PATRIC Pathways: Butanoate metabolism, Oxidative phosphorylation, Citrate cycle (TCA cycle), 2,4-Dichlorobenzoate degradation, Reductive carboxylate cycle (CO2 fixation)

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1553

Tuberculist Genomic Region

Rv1767 Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44)

Details for Rv1767 - Possible carboxymuconolactone decarboxylase family protein (EC 4.1.1.44)

GO Terms: NA

PATRIC Pathways: Benzoate degradation via hydroxylation

Essentiality: Griffin Essential: 0.63 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1767

Tuberculist Genomic Region

Rv1913 Fumarylacetoacetase (EC 3.7.1.2)

Details for Rv1913 - Fumarylacetoacetase (EC 3.7.1.2)

GO Terms: NA

PATRIC Pathways: Tyrosine metabolism, Styrene degradation

Essentiality: Griffin Essential: 0.75 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1913

Tuberculist Genomic Region

Rv2317 Inositol transport system permease protein

Details for Rv2317 - Inositol transport system permease protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.01 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2317

Tuberculist Genomic Region

Rv2541

Details for Rv2541 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.17 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2541

Tuberculist Genomic Region

Rv2893 POSSIBLE OXIDOREDUCTASE (EC 1.-.-.-)

Details for Rv2893 - POSSIBLE OXIDOREDUCTASE (EC 1.-.-.-)

GO Terms: GO:0005829

PATRIC Pathways: Carotenoid biosynthesis, Secondary bile acid biosynthesis, Puromycin biosynthesis, Trinitrotoluene degradation, Biosynthesis of type II polyketide products, alpha-Linolenic acid metabolism, Insect hormone biosynthesis, Isoquinoline alkaloid biosynthesis, Porphyrin and chlorophyll metabolism, Amino sugar and nucleotide sugar metabolism

Essentiality: Griffin Essential: 0.75 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2893

Tuberculist Genomic Region

Rv3428c Mobile element protein

Details for Rv3428c - Mobile element protein

GO Terms: GO:0005576, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.42 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3428c

Tuberculist Genomic Region

Rv3667 Acetyl-coenzyme A synthetase (EC 6.2.1.1)

Details for Rv3667 - Acetyl-coenzyme A synthetase (EC 6.2.1.1)

GO Terms: GO:0003987, GO:0005618, GO:0005886

PATRIC Pathways: Methane metabolism, Reductive carboxylate cycle (CO2 fixation), Glycolysis / Gluconeogenesis, Propanoate metabolism, Pyruvate metabolism

Essentiality: Griffin Essential: 0.27 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3667

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.00012 e-value: 19
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 19 of 19
GO:0008150 |

biological_process

GO:0005515 |

protein binding

GO:0040007 |

growth

GO:0000155 |

two-component sensor activity

GO:0016020 |

membrane

GO:0006950 |

response to stress

GO:0005524 |

ATP binding

GO:0007165 |

signal transduction

GO:0005737 |

cytoplasm

GO:0005886 |

plasma membrane

GO:0008556 |

potassium-transporting ATPase activity

GO:0044119 |

growth of symbiont in host cell

GO:0004300 |

enoyl-CoA hydratase activity

GO:0000104 |

succinate dehydrogenase activity

GO:0005829 |

cytosol

GO:0005576 |

extracellular region

GO:0003987 |

acetate-CoA ligase activity

GO:0005618 |

cell wall