Module 528 Residual: 0.42

Title Bicluster Model Residual Score
bicluster_0528 v02 0.42 -13.93
Displaying 1 - 17 of 17
Rv1894c 2-nitropropane dioxygenase (EC 1.13.11.32)

Details for Rv1894c - 2-nitropropane dioxygenase (EC 1.13.11.32)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.83 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1894c

Tuberculist Genomic Region

Rv0211 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)

Details for Rv0211 - Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32)

GO Terms: GO:0004613, GO:0005576, GO:0005829, GO:0005886, GO:0010106, GO:0052572

PATRIC Pathways: Glycolysis / Gluconeogenesis, Pyruvate metabolism, Citrate cycle (TCA cycle)

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0211

Tuberculist Genomic Region

Rv0467 Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30)

Details for Rv0467 - Isocitrate lyase (EC 4.1.3.1) / Methylisocitrate lyase (EC 4.1.3.30)

GO Terms: GO:0004451, GO:0001101, GO:0004451, GO:0005829, GO:0005886, GO:0006097, GO:0009405, GO:0010034, GO:0046421, GO:0052572, GO:0070542, GO:0071456, GO:0075141

PATRIC Pathways: Propanoate metabolism, Glyoxylate and dicarboxylate metabolism

Essentiality: Griffin Essential: 0.02 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0467

Tuberculist Genomic Region

Rv0485 Transcriptional regulatory protein

Details for Rv0485 - Transcriptional regulatory protein

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.94 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0485

Tuberculist Genomic Region

Rv0639 Transcription antitermination protein NusG

Details for Rv0639 - Transcription antitermination protein NusG

GO Terms: GO:0003711, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0639

Tuberculist Genomic Region

Rv0640 LSU ribosomal protein L11p (L12e)

Details for Rv0640 - LSU ribosomal protein L11p (L12e)

GO Terms: GO:0005622, GO:0005840, GO:0003735, GO:0006412, GO:0005618, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.05 | In vitro Essential: 0.07 | In vivo Essential: NA

Go to Gene Page: Rv0640

Tuberculist Genomic Region

Rv0641 LSU ribosomal protein L1p (L10Ae)

Details for Rv0641 - LSU ribosomal protein L1p (L10Ae)

GO Terms: GO:0006412, GO:0005622, GO:0005840, GO:0003735, GO:0005829, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.03 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0641

Tuberculist Genomic Region

Rv1065

Details for Rv1065 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1065

Tuberculist Genomic Region

Rv1066

Details for Rv1066 -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.71 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv1066

Tuberculist Genomic Region

Rv2783c Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)

Details for Rv2783c - Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)

GO Terms: GO:0004654, GO:0005829, GO:0005886

PATRIC Pathways: Pyrimidine metabolism, Purine metabolism

Essentiality: Griffin Essential: 0.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2783c

Tuberculist Genomic Region

Rv2837c FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type

Details for Rv2837c - FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type

GO Terms: GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.05 | In vivo Essential: NA

Go to Gene Page: Rv2837c

Tuberculist Genomic Region

Rv2838c Ribosome-binding factor A

Details for Rv2838c - Ribosome-binding factor A

GO Terms: GO:0006364

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.03 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2838c

Tuberculist Genomic Region

Rv2839c Translation initiation factor 2

Details for Rv2839c - Translation initiation factor 2

GO Terms: GO:0006413, GO:0006412, GO:0003743, GO:0005525, GO:0005576, GO:0005618, GO:0005886, GO:0040007

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.00 | In vitro Essential: 0.13 | In vivo Essential: NA

Go to Gene Page: Rv2839c

Tuberculist Genomic Region

Rv2940c Polyketide synthase

Details for Rv2940c - Polyketide synthase

GO Terms: GO:0005618, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2940c

Tuberculist Genomic Region

Rv3455c tRNA pseudouridine synthase A (EC 4.2.1.70)

Details for Rv3455c - tRNA pseudouridine synthase A (EC 4.2.1.70)

GO Terms: GO:0004730, GO:0005618, GO:0040007

PATRIC Pathways: Pyrimidine metabolism

Essentiality: Griffin Essential: 0.02 | In vitro Essential: 0.14 | In vivo Essential: NA

Go to Gene Page: Rv3455c

Tuberculist Genomic Region

Rv3515c Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Details for Rv3515c - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

GO Terms: GO:0004467, GO:0004467, GO:0052572

PATRIC Pathways: Fatty acid metabolism

Essentiality: Griffin Essential: 0.93 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3515c

Tuberculist Genomic Region

Rv3516 Enoyl-CoA hydratase (EC 4.2.1.17)
Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 0.00023 e-value: 47
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 31 of 31
GO:0004613 |

phosphoenolpyruvate carboxykinase (GTP) activity

GO:0005576 |

extracellular region

GO:0005829 |

cytosol

GO:0005886 |

plasma membrane

GO:0010106 |

cellular response to iron ion starvation

GO:0052572 |

response to host immune response

GO:0004451 |

isocitrate lyase activity

GO:0001101 |

response to acid

GO:0006097 |

glyoxylate cycle

GO:0009405 |

pathogenesis

GO:0010034 |

response to acetate

GO:0046421 |

methylisocitrate lyase activity

GO:0070542 |

response to fatty acid

GO:0071456 |

cellular response to hypoxia

GO:0075141 |

maintenance of symbiont tolerance to host environment

GO:0003711 |

transcription elongation regulator activity

GO:0005622 |

intracellular

GO:0005840 |

ribosome

GO:0003735 |

structural constituent of ribosome

GO:0006412 |

translation

GO:0005618 |

cell wall

GO:0040007 |

growth

GO:0004654 |

polyribonucleotide nucleotidyltransferase activity

GO:0006364 |

rRNA processing

GO:0006413 |

translational initiation

GO:0003743 |

translation initiation factor activity

GO:0005525 |

GTP binding

GO:0004730 |

pseudouridylate synthase activity

GO:0004467 |

long-chain fatty acid-CoA ligase activity

GO:0004300 |

enoyl-CoA hydratase activity