Organism : Rhodobacter sphaeroides 2.4.1 | Module List :
Regulation information for RSP_3491(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for RSP_3491
|Gene||Common Name||Description||Module membership|
|RSP_0834||xanB||mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase (NCBI)||125, 153|
|RSP_0835||manB||phosphomannomutase (NCBI)||153, 246|
|RSP_1324||flgH||Flagellar L-ring protein (NCBI)||153, 359|
|RSP_1325||RSP_1325||putative flagellar basal-body P-ring formation protein FlgA (NCBI)||153, 359|
|RSP_1326||RSP_1326||putative flagellar basal body rod protein (NCBI)||153, 359|
|RSP_1327||RSP_1327||putative flagellar basal body rod protein (NCBI)||153, 359|
|RSP_1328||RSP_1328||flagellar biosynthetic protein FliQ (NCBI)||153, 359|
|RSP_1329||fliE||putative flagellar hook-basal body complex protein (NCBI)||153, 359|
|RSP_1330||RSP_1330||putative flagellar basal-body rod protein FlgC (NCBI)||153, 359|
|RSP_1331||RSP_1331||hypothetical protein (NCBI)||153, 359|
|RSP_1981||RSP_1981||Deoxyribodipyrimidine photolyase (NCBI)||153, 282|
|RSP_2944||RSP_2944||hypothetical protein (NCBI)||77, 153|
|RSP_2995||RSP_2995||possible phage major capsid protein, gp36 (NCBI)||77, 153|
|RSP_3472||RSP_3472||hypothetical protein (NCBI)||79, 119|
|RSP_3474||RSP_3474||hypothetical protein (NCBI)||79, 119|
|RSP_3475||RSP_3475||Serine/Threonine protein kinase (NCBI)||79, 119|
|RSP_3476||RSP_3476||hypothetical protein (NCBI)||79, 119|
|RSP_3477||RSP_3477||hypothetical protein (NCBI)||79, 119|
|RSP_3478||RSP_3478||hypothetical protein (NCBI)||79, 119|
|RSP_3479||RSP_3479||hypothetical protein (NCBI)||79, 119|
|RSP_3480||RSP_3480||hypothetical protein (NCBI)||79, 119|
|RSP_3481||RSP_3481||hypothetical protein (NCBI)||79, 119|
|RSP_3482||RSP_3482||hypothetical protein (NCBI)||79, 119|
|RSP_3483||RSP_3483||hypothetical protein (NCBI)||79, 119|
|RSP_3484||RSP_3484||hypothetical protein (NCBI)||79, 119|
|RSP_3485||RSP_3485||hypothetical protein (NCBI)||79, 119|
|RSP_3486||RSP_3486||Possible outer membrane protein, OmpA family (NCBI)||79, 119|
|RSP_3487||RSP_3487||hypothetical protein (NCBI)||79, 119|
|RSP_3488||RSP_3488||hypothetical protein (NCBI)||79, 119|
|RSP_3489||RSP_3489||hypothetical protein (NCBI)||119, 153|
|RSP_3490||RSP_3490||hypothetical protein (NCBI)||119, 153|
|RSP_3491||RSP_3491||hypothetical protein (NCBI)||119, 153|
|RSP_3492||RSP_3492||Protein phosphatase 2C-like (NCBI)||119, 153|
|RSP_3494||RSP_3494||OmpA/MotB domain protein (NCBI)||119, 153|
|RSP_3575||gvpK||putative gas vesicle synthesis protein (NCBI)||153, 325|
|RSP_3578||gvpF2||putative gas vesicle synthesis protein (NCBI)||153, 253|
|RSP_3582||gvpN||ATPase (NCBI)||153, 253|
|RSP_3612||RSP_3612||hypothetical protein (NCBI)||153, 300|
|RSP_6070||RSP_6070||hypothetical protein (NCBI)||153, 205|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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