Methanococcus maripaludis S2 Module 149 Residual: 0.30

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Summary

Residual: 0.30 Score: -17.2013 version: mmp_cmonkey_11_Oct_11

Members

MMP0034 conserved hypothetical protein (NCBI)

Details for MMP0034 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006144, GO:0004846

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0034

Tuberculist Genomic Region

MMP1108 magnesium, nickel and cobalt transport protein (NCBI)

Details for MMP1108 - magnesium, nickel and cobalt transport protein (NCBI)

GO Terms: GO:0006824, GO:0015693, GO:0016020, GO:0015087, GO:0015095

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1108

Tuberculist Genomic Region

MMP0137 Deoxyhypusine synthase (NCBI)

Details for MMP0137 - Deoxyhypusine synthase (NCBI)

GO Terms: GO:0008612, GO:0050983, GO:0004171

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0137

Tuberculist Genomic Region

MMP1307 methyltransferase related protein (NCBI)

Details for MMP1307 - methyltransferase related protein (NCBI)

GO Terms: GO:0006479, GO:0005737, GO:0003723, GO:0008276

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1307

Tuberculist Genomic Region

MMP0284 translation inititation factor aIF2 (NCBI)

Details for MMP0284 - translation inititation factor aIF2 (NCBI)

GO Terms: GO:0006413, GO:0005622, GO:0003924, GO:0003743, GO:0005525

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0284

Tuberculist Genomic Region

MMP1327 DNA-directed RNA polymerase, subunit K (NCBI)

Details for MMP1327 - DNA-directed RNA polymerase, subunit K (NCBI)

GO Terms: GO:0006351, GO:0045449, GO:0030880, GO:0003902, GO:0003899, GO:0003901, GO:0003677, GO:0003900

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1327

Tuberculist Genomic Region

MMP0319 precorrin-2 C-20 methyltransferase (NCBI)

Details for MMP0319 - precorrin-2 C-20 methyltransferase (NCBI)

GO Terms: GO:0009236, GO:0030788, GO:0043781

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0319

Tuberculist Genomic Region

MMP1328 Enolase (NCBI)

Details for MMP1328 - Enolase (NCBI)

GO Terms: GO:0006096, GO:0000015, GO:0004634

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1328

Tuberculist Genomic Region

MMP0415 Eukaryotic protein kinase:Glycoprotease (M22) metalloprotease:Tyrosine protein kinase (NCBI)

Details for MMP0415 - Eukaryotic protein kinase:Glycoprotease (M22) metalloprotease:Tyrosine protein kinase (NCBI)

GO Terms: GO:0006508, GO:0006468, GO:0009103, GO:0016020, GO:0004674, GO:0004713, GO:0008270, GO:0005524, GO:0008450

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0415

Tuberculist Genomic Region

MMP1356 conserved hypothetical protein (NCBI)

Details for MMP1356 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009435, GO:0005737, GO:0003952, GO:0004808

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1356

Tuberculist Genomic Region

MMP0564 conserved hypothetical archaeal protein (NCBI)

Details for MMP0564 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0003824, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0564

Tuberculist Genomic Region

MMP1357 ThiamineS (NCBI)

Details for MMP1357 - ThiamineS (NCBI)

GO Terms: GO:0006790

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1357

Tuberculist Genomic Region

MMP0694 Beta-lactamase-like:KH domain (NCBI)

Details for MMP0694 - Beta-lactamase-like:KH domain (NCBI)

GO Terms: GO:0003723, GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0694

Tuberculist Genomic Region

MMP1491 Chlorohydrolase (NCBI)

Details for MMP1491 - Chlorohydrolase (NCBI)

GO Terms: GO:0016810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1491

Tuberculist Genomic Region

MMP0905 conserved hypothetical protein (NCBI)

Details for MMP0905 - conserved hypothetical protein (NCBI)

GO Terms: GO:0000287, GO:0030955

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0905

Tuberculist Genomic Region

MMP1492 Orotate phosphoribosyltransferase (NCBI)

Details for MMP1492 - Orotate phosphoribosyltransferase (NCBI)

GO Terms: GO:0006355, GO:0009116, GO:0006221, GO:0004588, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1492

Tuberculist Genomic Region

MMP0906 conserved hypothetical protein (NCBI)

Details for MMP0906 - conserved hypothetical protein (NCBI)

GO Terms: GO:0042779, GO:0042781

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0906

Tuberculist Genomic Region

MMP1582 Pyruvoyl-dependent arginine decarboxylase, PvlArgDC, alpha and beta subunits (NCBI)

Details for MMP1582 - Pyruvoyl-dependent arginine decarboxylase, PvlArgDC, alpha and beta subunits (NCBI)

GO Terms: GO:0006527, GO:0008792

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1582

Tuberculist Genomic Region

MMP0907 predicted archaeal transcriptional regulator (NCBI)

Details for MMP0907 - predicted archaeal transcriptional regulator (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0907

Tuberculist Genomic Region

MMP1614 histidyl-tRNA synthetase (NCBI)

Details for MMP1614 - histidyl-tRNA synthetase (NCBI)

GO Terms: GO:0000105, GO:0006427, GO:0005737, GO:0005524, GO:0004821

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1614

Tuberculist Genomic Region

MMP0941 phosphoadenosine phosphosulfate sulfotransferase; putative (NCBI)

Details for MMP0941 - phosphoadenosine phosphosulfate sulfotransferase; putative (NCBI)

GO Terms: GO:0008152, GO:0004604, GO:0016740, GO:0003723

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0941

Tuberculist Genomic Region

MMP1112 conserved hypothetical archaeal protein (NCBI)

Details for MMP1112 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1112

Tuberculist Genomic Region

MMP0953 precorrin-3B C17-methyltransferase (NCBI)

Details for MMP0953 - precorrin-3B C17-methyltransferase (NCBI)

GO Terms: GO:0009236, GO:0030789

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0953

Tuberculist Genomic Region

MMP1361 DNA-directed RNA polymerase subunit B (NCBI)

Details for MMP1361 - DNA-directed RNA polymerase subunit B (NCBI)

GO Terms: GO:0006350, GO:0003902, GO:0003900, GO:0003677, GO:0003899, GO:0003901

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1361

Tuberculist Genomic Region

MMP1085 conserved hypothetical protein (NCBI)

Details for MMP1085 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0008168

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1085

Tuberculist Genomic Region

MMP0340 pyruvate carboxylase subunit B (NCBI)

Details for MMP0340 - pyruvate carboxylase subunit B (NCBI)

GO Terms: GO:0006814, GO:0008152, GO:0004736, GO:0008948

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0340

Tuberculist Genomic Region

Displaying 1 - 26 of 26

Motifs

Motif 1: e-value: 0.6 e-value: 150

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0033

LysR family member (NCBI)
 up-regulates 0.33

MMP0033

MMP0637

Transcriptional regulator, ArsR family member (NCBI)

MMP0678

Predicted transcriptional regulator; Helix-turn-helix motif (NCBI)
 up-regulates 0.19

MMP0637

MMP0678

MMP0052

Conserved Hypothetical protein with 2 CBS domains (NCBI)

MMP0480

conserved hypothetical protein (NCBI)
 down-regulates -0.16

MMP0052

MMP0480

MMP1704

conserved hypothetical archeal protein (NCBI)
 up-regulates 0.16

MMP1704

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0044712 single-organism catabolic process 10 0.31 3 0.0019
BP GO:0009056 catabolic process 13 0.41 3 0.0044
BP GO:1901575 organic substance catabolic process 13 0.41 3 0.0044
BP GO:1901565 organonitrogen compound catabolic proces... 4 0.12 2 0.0048
BP GO:0044281 small molecule metabolic process 87 2.72 6 0.0079
BP GO:0044710 single-organism metabolic process 99 3.09 6 0.0174
BP GO:0044763 single-organism cellular process 111 3.47 6 0.0352
BP GO:0044699 single-organism process 117 3.66 6 0.0486
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003723 RNA binding 57 1.11 4 0.0200
MF GO:0003676 nucleic acid binding 122 2.37 6 0.0200

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