11949 Nop14
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11949 chr_22 Nop14 986797 990683 - Nop14

Synonyms

NCBI ID Ensembl Genomes exon ID
7449447 Thaps11949.4, Thaps11949.3, Thaps11949.2, Thaps11949.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0278
 0.24

Most Highly Correlated Transcripts

268735

(GPB1) WD40
0.9438

36434

DUF1253
0.942

39845

(DNA_TopoIV) PRK05560
0.9415

32395

RNA_pol
0.9384

268598

COG1094
0.9281

21462

(rpoT) rpot-like RNA polymerase
0.9271

2772

Utp14
0.9259

29018

NMD3
0.9248

39540

Alpha_ANH_like_II
0.9232

25689

hypothetical protein
0.9225

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Nop14 Nop14-like family; Emg1 and Nop14 are novel proteins whose interaction is required for the... - 318.879 1.94E-93 37 - 1092 multi-dom 252410

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_46837 PHATR_46837 203781 260290 Not available Not available AT1G69070.1 351449

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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