24590 DUF663Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24590	chr_13	DUF663	111797	115821	-	DUF663

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450558	Thaps24590.1, Thaps24590.3, Thaps24590.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0220

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0272	0.25	4.6 32

Most Highly Correlated Transcripts

bd1667 (bd1667) Mpp10 0.959	23862 Syo1_like superfamily 0.9406	32374 TPR 0.927	bd1709 (bd1709) NA 0.92	42599 SrmB 0.9156	268688 hypothetical protein 0.915
21082 Cupin_8 superfamily 0.915	268689 RRM6_RBM19_RRM5_MRD1 0.9143	7265 PIN_SF superfamily 0.9132	20985 COG5593 0.9109

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DUF663 superfamily		Protein of unknown function (DUF663); This family contains several uncharacterized eukaryotic...	-	265.767	1.54E-80	728 - 1062	superfamily	252898
DUF663 superfamily		Protein of unknown function (DUF663); This family contains several uncharacterized eukaryotic...	-	265.767	1.54E-80	728 - 1062	superfamily	252898

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_6258	PHATRDRAFT_6258	182689	102750	61830	Cre16.g673700.t1.2	AT1G42440.1	554279

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments