Organism : Methanococcus maripaludis S2 | Module List :
Regulation information for MMP0448(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for MMP0448
|Gene||Common Name||Description||Module membership|
|MMP0011||DNA-cytosine methyltransferase||4, 104|
|MMP0105||hypothetical protein MMP0105||4, 107|
|MMP0140||(NiFe) hydrogenase maturation protein HypF||4, 85|
|MMP0181||hypothetical protein MMP0181||4, 58|
|MMP0183||ribB||3,4-dihydroxy-2-butanone 4-phosphate synthase||8, 70|
|MMP0216||cation transport ATPase||4, 41, 95|
|MMP0220||Sodium/proline symporter-related||70, 140|
|MMP0243||hypothetical protein MMP0243||4, 25, 38|
|MMP0270||Fe-S cluster domain-containing protein||21, 70|
|MMP0272||ABC transporter ATPase||21, 70|
|MMP0273||comA||phosphosulfolactate synthase||21, 70|
|MMP0274||hypE||hydrogenase expression/formation protein HypE||67, 70|
|MMP0296||hypothetical protein MMP0296||4, 129|
|MMP0333||hypothetical protein MMP0333||4, 126|
|MMP0345||hypothetical protein MMP0345||7, 70|
|MMP0371||hypothetical protein MMP0371||8, 70|
|MMP0382||putative ATPase RIL||8, 70, 78|
|MMP0385||pyrH||uridylate kinase||70, 78|
|MMP0392||purD||phosphoribosylamine--glycine ligase||4, 75, 104|
|MMP0397||alaS||alanyl-tRNA synthetase||70, 78|
|MMP0398||hypothetical protein MMP0398||70, 80, 87|
|MMP0399||htpX||heat shock protein HtpX||70, 78|
|MMP0400||ehbQ||amino acid-binding ACT domain-containing protein||70, 78|
|MMP0401||metE||methionine synthase||4, 15, 80|
|MMP0402||hypothetical protein MMP0402||15, 70|
|MMP0412||MiaB-like tRNA modifying protein||4, 25, 87|
|MMP0447||nitrogenase-like protein||4, 146|
|MMP0448||hypothetical protein MMP0448||4, 70|
|MMP0451||hypothetical protein MMP0451||1, 70|
|MMP0479||hypothetical protein MMP0479||4, 95|
|MMP0498||hypothetical protein MMP0498||52, 70|
|MMP0500||Iron-sulfur flavoprotein-like protein||70, 78|
|MMP0503||hypothetical protein MMP0503||4, 126|
|MMP0524||hypothetical protein MMP0524||4, 58, 146, 153, 163|
|MMP0525||hypothetical protein MMP0525||4, 146, 163|
|MMP0571||moaA||molybdenum cofactor biosynthesis protein A||4, 89|
|MMP0618||hypothetical protein MMP0618||21, 70|
|MMP0619||hypothetical protein MMP0619||21, 70|
|MMP0620||atwA||methyl coenzyme M reductase, component A2||21, 70|
|MMP0816||seryl-tRNA synthetase-like protein||8, 70|
|MMP0886||cobalt ABC transporter inner membrane protein||4, 151|
|MMP0898||cellulose-binding protein||8, 70|
|MMP0899||ATP/GTP-binding motif-containing protein||70, 81|
|MMP0900||rhodanese domain-containing protein||70, 81|
|MMP0904||selD||selenophosphate synthetase||21, 70|
|MMP0948||hypothetical protein MMP0948||4, 115|
|MMP0949||tRNA CCA-pyrophosphorylase||4, 70|
|MMP0954||hypothetical protein MMP0954||21, 70|
|MMP0966||cobA||uroporphyrin-III C-methyltransferase||68, 70|
|MMP1000||hypothetical protein MMP1000||4, 95|
|MMP1022||hypothetical protein MMP1022||21, 70|
|MMP1064||adenylate cyclase||4, 51|
|MMP1089||polysaccharide biosynthesis protein||14, 70|
|MMP1093||coaD||phosphopantetheine adenylyltransferase||52, 70|
|MMP1129||ppiB||cyclophilin type peptidyl-prolyl cis-trans isomerase||40, 70, 78|
|MMP1130||hypothetical protein MMP1130||4, 38|
|MMP1137||Lrp/AsnC family transcriptional regulator||70, 78|
|MMP1138||thiM||hydroxyethylthiazole kinase||70, 78|
|MMP1139||thiE||thiamine-phosphate pyrophosphorylase||27, 70, 78|
|MMP1150||mtaA||uroporphyrinogen decarboxylase||4, 41, 95|
|MMP1228||hypothetical protein MMP1228||4, 22, 142|
|MMP1303||sensory transduction histidine kinase||4, 28, 66|
|MMP1304||response regulator receiver protein||4, 126|
|MMP1305||hypothetical protein MMP1305||4, 126|
|MMP1307||methyltransferase-like protein||4, 149|
|MMP1645||aspartate/glutamate/uridylate kinase||4, 126|
|MMP1698||hypothetical protein MMP1698||4, 8|
|RNA_17||tRNA-Pro2||Pro tRNA||4, 100|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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