Rv1049 Organic hydroperoxide resistance transcriptional regulator

Rv1049 (Organic hydroperoxide resistance transcriptional regulator) is predicted to be co-regulated in modules bicluster_0283 with residual 0.50 and bicluster_0361 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.01 and 1.50 for bicluster_0283 and 0.00 and 0.14 for bicluster_0361 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 71 - 80 of 130
Gene Target Differential Expression Distance Expression pvalue Type
HTH-type transcriptional regulator
Repressed 52 -0.7 0.0458282 CDS
Transporter, LysE family
Induced -34 1.07 0.00523939 Primary.TSS
Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster
No -34 0.29 0.434358 CDS
Methyltransferase type 12
No -77 0.14 0.6613 Primary.TSS
PE family protein
Induced -39 1.42 0.0443628 Primary.TSS
No -18 0.01 0.981249 Primary.TSS
Dihydroorotate dehydrogenase (EC 1.3.3.1)
No 26 0.18 0.445422 Primary.TSS
Repressed -14 -0.99 0.0000137 Primary.TSS
No -14 -0.28 0.472882 Internal.TSS
Probable exported protease [EC:3.4.-.-]
No -118 0.37 0.00929958 Antisense.TSS
not assigned to any KEGG Pathway.
GO:0005829

cytosol

cytosol

Details: 
The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
GO Category: 
cellular_component
371
Total items in this category:  
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 11.16 U
D3I 3 3 3.83 10.84 I
D3U 3 3 3.83 10.40 U
D5I 9 5 6.00 9.28 I
D5U 17 5 6.00 11.58 U
D7I 18 7 8.14 7.74 I
D7U 19 7 8.14 10.82 U
D14I 4 14 15.63 3.03 I
D14U 4 14 15.63 9.41 U
D17I 3 17 19.15 2.28 I
D17U 3 17 19.15 9.07 U
D21I 4 21 23.23 2.16 I
D21U 4 21 23.23 8.91 U
D24I 3 24 26.60 2.33 I
D24U 3 24 26.60 8.95 U
D28I 4 28 30.61 1.11 I
D28U 4 28 30.61 8.77 U