Rv2034 Transcriptional regulator, ArsR family

Rv2034 (Transcriptional regulator, ArsR family) is predicted to be co-regulated in modules bicluster_0120 with residual 0.55 and bicluster_0546 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 0.00 for bicluster_0120 and 0.00 and 0.21 for bicluster_0546 respectively.

These modules are enriched for following go terms: nucleic acid binding transcription facto..., sequence-specific DNA binding transcript... .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 121 - 130 of 150
Gene Target Differential Expression Distance Expression pvalue Type
Two component transcriptional regulatory protein DevR
No 43 0.56 0.0272709 Primary.TSS
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
No -5 0.47 0.109308 Primary.TSS
Oxidoreductase (EC 1.1.1.-)
No -120 0.14 0.421634 Internal.TSS
Oxidoreductase (EC 1.1.1.-)
No -112 0.14 0.421634 CDS
WhiB-like transcription regulator
No -24 -0.37 0.282733 Primary.TSS
POSSIBLE LINOLEOYL-CoA DESATURASE (DELTA(6)-DESATURASE)
No -7 0.41 0.662081 Primary.TSS
Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase
No 66 -0.33 0.0786383 CDS
Phosphate transport system regulatory protein PhoU
No -72 -0.41 0.00249254 Primary.TSS
Mercuric resistance operon regulatory protein
No 0 -0.06 0.909933 Primary.TSS
Phytoene synthase (EC 2.5.1.32)
Induced 24 0.96 0.00000483 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 10.48 U
D3I 3 3 3.83 10.74 I
D3U 3 3 3.83 10.88 U
D5I 9 5 6.00 8.69 I
D5U 17 5 6.00 10.11 U
D7I 18 7 8.14 6.93 I
D7U 19 7 8.14 9.41 U
D14I 4 14 15.63 2.80 I
D14U 4 14 15.63 9.76 U
D17I 3 17 19.15 I
D17U 3 17 19.15 9.50 U
D21I 4 21 23.23 2.16 I
D21U 4 21 23.23 9.28 U
D24I 3 24 26.60 I
D24U 3 24 26.60 9.11 U
D28I 4 28 30.61 I
D28U 4 28 30.61 8.90 U