Rv2324 Transcriptional regulator, AsnC family

Rv2324 (Transcriptional regulator, AsnC family) is predicted to be co-regulated in modules bicluster_0346 with residual 0.51 and bicluster_0420 with residual 0.47.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 0.14 for bicluster_0346 and 0.00 and 0.00 for bicluster_0420 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 81 - 90 of 128
Gene Target Differential Expression Distance Expression pvalue Type
Possible membrane protein
No -115 0.09 0.920974 Internal.TSS
Possible membrane protein
No -100 0.09 0.920974 CDS
No -37 -0.08 0.940509 Primary.TSS
Repressed -37 -1.31 0.0000000000559 Antisense.TSS
Repressed -55 -1.31 0.0000000000559 Internal.TSS
Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7)
No 47 -0.11 0.962605 Primary.TSS
No -38 -0.7 0.110242 CDS
DNA ligase (EC 6.5.1.2)
No -89 -0.42 0.423047 CDS
Repressed -19 -1.15 0.0161926 Primary.TSS
No 23 -0.19 0.907098 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 12.79 U
D3I 3 3 3.83 12.85 I
D3U 3 3 3.83 13.00 U
D5I 9 5 6.00 13.44 I
D5U 17 5 6.00 14.02 U
D7U 19 7 8.14 12.96 U
D7I 18 7 8.14 11.63 I
D14I 4 14 15.63 5.04 I
D14U 4 14 15.63 12.17 U
D17I 3 17 19.15 3.15 I
D17U 3 17 19.15 11.85 U
D21I 4 21 23.23 7.99 I
D21U 4 21 23.23 12.32 U
D24I 3 24 26.60 I
D24U 3 24 26.60 12.06 U
D28I 4 28 30.61 4.59 I
D28U 4 28 30.61 12.59 U