Rv3066 Transcriptional regulator, TetR family

Rv3066 (Transcriptional regulator, TetR family) is predicted to be co-regulated in modules bicluster_0385 with residual 0.48 and bicluster_0534 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.63 and 9.20 for bicluster_0385 and 0.00 and 0.02 for bicluster_0534 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 11 - 14 of 14
Gene Target Differential Expression Distance Expression pvalue Type
No -16 -0.18 0.531279 Internal.TSS
FadE30
No -10 0.08 0.916481 Antisense.TSS
Coenzyme F420-dependent oxidoreductase
No 6 -0.03 0.926489 Primary.TSS
No 6 0.15 0.793598 Antisense.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 10.29 U
D3I 3 3 3.83 9.56 I
D3U 3 3 3.83 9.04 U
D5I 9 5 6.00 12.12 I
D5U 17 5 6.00 11.66 U
D7I 18 7 8.14 10.87 I
D7U 19 7 8.14 9.87 U
D14I 4 14 15.63 9.26 I
D14U 4 14 15.63 8.25 U
D17I 3 17 19.15 9.34 I
D17U 3 17 19.15 7.87 U
D21I 4 21 23.23 9.85 I
D21U 4 21 23.23 7.83 U
D24I 3 24 26.60 10.36 I
D24U 3 24 26.60 7.46 U
D28I 4 28 30.61 9.99 I
D28U 4 28 30.61 8.00 U