Rv3249c Transcriptional regulator, TetR family

Rv3249c (Transcriptional regulator, TetR family) is predicted to be co-regulated in modules bicluster_0063 with residual 0.56 and bicluster_0167 with residual 0.51.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.01 and 37.00 for bicluster_0063 and 0.00 and 49.00 for bicluster_0167 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 71 - 80 of 129
Gene Target Differential Expression Distance Expression pvalue Type
No -33 -0.15 0.674663 Primary.TSS
No -130 0.08 0.842413 Primary.TSS
Repressed -4 -0.64 0.00000997 Primary.TSS
PPE family protein
No -23 0.02 0.962849 Antisense.TSS
No -123 -0.07 0.861433 Antisense.TSS
Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2)
No -12 0 0.992576 Primary.TSS
ATPases involved in chromosome partitioning
No -12 0.02 0.982035 Antisense.TSS
Ribosome-binding factor A
No -142 -0.04 0.903835 Antisense.TSS
Immunogenic protein Mpt70
No -103 -0.1 0.872185 Antisense.TSS
Resolvase
No 5 0.08 0.866989 Antisense.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 13.44 U
D3I 3 3 3.83 13.39 I
D3U 3 3 3.83 13.06 U
D5I 9 5 6.00 13.87 I
D5U 17 5 6.00 13.73 U
D7I 18 7 8.14 13.67 I
D7U 19 7 8.14 13.15 U
D14I 4 14 15.63 11.79 I
D14U 4 14 15.63 11.70 U
D17I 3 17 19.15 10.81 I
D17U 3 17 19.15 10.88 U
D21I 4 21 23.23 10.36 I
D21U 4 21 23.23 11.06 U
D24I 3 24 26.60 9.00 I
D24U 3 24 26.60 9.91 U
D28I 4 28 30.61 8.76 I
D28U 4 28 30.61 10.03 U