Organism : Rhodobacter sphaeroides 2.4.1 | Module List :
hypothetical protein (NCBI)
Functional Annotations (1)
Regulation information for RSP_1640(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for RSP_1640
Module neighborhood information for RSP_1640
|Gene||Common Name||Description||Module membership|
|RSP_0088||RSP_0088||ycfI, putative structural proteins (NCBI)||73, 168|
|RSP_0219||RSP_0219||hypothetical protein (NCBI)||168, 220|
|RSP_0328||nnrS||hypothetical protein (NCBI)||168, 249|
|RSP_0470||RSP_0470||hypothetical protein (NCBI)||168, 249|
|RSP_0511||RSP_0511||two component transcriptional regulator, LuxR family (NCBI)||168, 176|
|RSP_0524||RSP_0524||hypothetical protein (NCBI)||74, 168|
|RSP_0700||RSP_0700||probable glycosyltransferase (NCBI)||233, 326|
|RSP_0701||RSP_0701||ABC peptide transporter, fused ATPase domains (NCBI)||233, 326|
|RSP_0801||RSP_0801||deacetylase / probable acetylpolyamine aminohydrolase (NCBI)||168, 242|
|RSP_0864||RSP_0864||Puative heme-binding hypothetical protein (NCBI)||168, 238|
|RSP_0947||RSP_0947||hypothetical protein (NCBI)||168, 213|
|RSP_0951||RSP_0951||hypothetical protein (NCBI)||168, 238|
|RSP_1069||RSP_1069||hypothetical protein (NCBI)||233, 267|
|RSP_1210||RSP_1210||Response regulator receiver protein (NCBI)||73, 168|
|RSP_1300||RSP_1300||hypothetical protein (NCBI)||168, 303|
|RSP_1392||thiP||ABC thiamine transporter, inner membrane subunit (NCBI)||233, 234|
|RSP_1638||RSP_1638||hypothetical protein (NCBI)||233, 236|
|RSP_1639||RSP_1639||hypothetical protein (NCBI)||233, 253|
|RSP_1640||RSP_1640||hypothetical protein (NCBI)||168, 233|
|RSP_1641||RSP_1641||hypothetical protein (NCBI)||233, 300|
|RSP_1644||RSP_1644||hypothetical protein (NCBI)||233, 300|
|RSP_1645||RSP_1645||putative phage-related protein (NCBI)||191, 233|
|RSP_1646||RSP_1646||possible transmembrane protein (NCBI)||233, 308|
|RSP_1694||RSP_1694||Probable short-chain dehydrogenase/reductase (NCBI)||233, 304|
|RSP_1782||RSP_1782||hypothetical membrane protein (NCBI)||233, 235|
|RSP_1783||RSP_1783||Predicted membrane protein (NCBI)||233, 235|
|RSP_1900||RSP_1900||hypothetical protein (NCBI)||91, 233|
|RSP_2632||argI||Arginase (NCBI)||95, 168|
|RSP_2791||RSP_2791||hypothetical protein (NCBI)||168, 236|
|RSP_2874||RSP_2874||Putative Beta-glucosidase A (NCBI)||229, 233|
|RSP_2884||glgX||glycogen debranching enzyme (NCBI)||233, 340|
|RSP_2957||RSP_2957||hypothetical protein (NCBI)||168, 213|
|RSP_3026||RSP_3026||Transcriptional regulator, MocR family (NCBI)||83, 168|
|RSP_3037||RSP_3037||Putative short-chain dehydrogenase/reductase (NCBI)||57, 168|
|RSP_3050||moaA||Molybdenum cofactor biosynthesis protein A (NCBI)||168, 308|
|RSP_3095||RSP_3095||sigma24 (NCBI)||168, 202|
|RSP_3096||RSP_3096||hypothetical protein (NCBI)||168, 304|
|RSP_3098||qoxB||QoxB, Quinol oxidase subunit II (NCBI)||168, 304|
|RSP_3122||RSP_3122||putative Glutathione S-transferase (NCBI)||233, 249|
|RSP_3137||RSP_3137||hypothetical protein (NCBI)||141, 168|
|RSP_3213||RSP_3213||hypothetical protein (NCBI)||168, 313|
|RSP_3257||RSP_3257||ABC peptide transporter, inner membrane subunit (NCBI)||168, 325|
|RSP_3287||upgC||ABC glycerol-3-phosphate transporter, ATPase subunit UpgC (NCBI)||115, 233|
|RSP_3288||ugpE||ABC glycerol-3-phosphate transporter, inner membrane subunit UgpE (NCBI)||115, 233|
|RSP_3289||ugpA||ABC glycerol-3-phosphate transporter, inner membrane subunit UgpA (NCBI)||115, 233|
|RSP_3290||ugpB||ABC glycerol-3-phosphate transporter, periplasmic binding protein, UgpB (NCBI)||115, 233|
|RSP_3343||RSP_3343||putative glycosyl transferase (NCBI)||14, 168|
|RSP_3444||RSP_3444||Putative Xaa-Pro aminopeptidase (NCBI)||61, 168|
|RSP_3446||RSP_3446||Putative amino acid hydrolase (NCBI)||61, 168|
|RSP_3447||RSP_3447||Putative dehydrogenase (NCBI)||61, 168|
|RSP_3497||RSP_3497||Caspase-1, p20 (NCBI)||103, 168|
|RSP_3566||RSP_3566||dimethylglycine dehydrogenase (NCBI)||27, 168|
|RSP_3651||RSP_3651||putative membrane protein (NCBI)||189, 233|
|RSP_3652||RSP_3652||Predicted phage phi-C31 gp36 major capsid-like protein (NCBI)||141, 233|
|RSP_3653||RSP_3653||hypothetical protein (NCBI)||141, 233|
|RSP_3693||RSP_3693||BtpA protein (NCBI)||94, 233|
|RSP_3694||RSP_3694||Putative transcription activator (NCBI)||94, 233|
|RSP_3788||RSP_3788||hypothetical protein (NCBI)||77, 233|
|RSP_3793||RSP_3793||hypothetical protein (NCBI)||73, 168|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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