Regulatory Modules
Displaying 41 - 50 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0071 | 600 | 13000 | 0.48 | DVU0275, DVU0453, DVU0754, DVU0938, DVU1180, DVU1449, DVU1450, DVU1471, DVU2059, DVU2684, DVU2770, DVU2840, DVU2935, DVU2937, DVU3226, DVU3227, DVU0276, DVU0565, DVU0566, DVU1244, DVU1528, DVU1529, DVU1656, DVU1867, DVU2060, DVU2427 | gene expression, RNA metabolic process, regulation of biological process, regulation of cellular process, biological regulation |
bicluster_0016 | 0.46 | 120 | 0.48 | DVU0407, DVU0941, DVU1005, DVU1244, DVU1335, DVU1572, DVU1582, DVU1612, DVU1647, DVU1648, DVU1649, DVU1655, DVU1656, DVU1850, DVU1861, DVU1867, DVU2201, DVU2609, DVU2650, DVU2655, DVUA0071, DVU0916, DVU1851 | cytoplasm, intracellular, intracellular part, exopeptidase activity, amino acid binding |
bicluster_0286 | 52 | 0.31 | 0.47 | DVU0043, DVU0044, DVU0045, DVU0307, DVU0317, DVU0318, DVU0320, DVU0410, DVU0518, DVU1441, DVU1442, DVU1443, DVU1444, DVU1805, DVU1854, DVU1880, DVU1961, DVU1963, DVU2065, DVU2444, DVU2445, DVU2991, DVU3002, DVU3232, DVU3234 | cellular component organization, cellular component organization or bioge..., cellular component assembly, cellular component biogenesis, organelle |
bicluster_0023 | 17 | 6.5 | 0.47 | DVU0348, DVU0487, DVU0646, DVU0647, DVU0648, DVU0649, DVU0650, DVU0843, DVU0988, DVU0990, DVU0991, DVU1039, DVU1040, DVU1927, DVU1929, DVU1930, DVU2322, DVU2463, DVU2464, DVU3023, DVU3154, DVU3161, DVU3168, DVU3198, DVU3199, DVU3200, DVU0084 | small molecule metabolic process, cellular nitrogen compound metabolic pro..., cellular aromatic compound metabolic pro..., heterocycle metabolic process, organic cyclic compound metabolic proces... |
bicluster_0009 | 12000 | 13000 | 0.47 | DVU0084, DVU0087, DVU0088, DVU0091, DVU0141, DVU0142, DVU0323, DVU0324, DVU0651, DVU0794, DVU1029, DVU1185, DVU1189, DVU1369, DVU1370, DVU1459, DVU1540, DVU1860, DVU1863, DVU2257, DVU2320, DVU2461, DVU2558, DVU3297, DVU2634 | coenzyme metabolic process, cofactor metabolic process, alpha-amino acid biosynthetic process, cellular amino acid biosynthetic process, organonitrogen compound biosynthetic pro... |
bicluster_0063 | 1.2 | 390 | 0.47 | DVU0056, DVU0227, DVU0334, DVU0395, DVU0454, DVU0575, DVU0619, DVU0620, DVU0656, DVU0854, DVU1090, DVU1408, DVU1537, DVU1579, DVU1616, DVU1820, DVU1877, DVU1888, DVU2471, DVU2612, DVU2644, DVU3345, DVU0034, DVU1434, DVU2639, DVU3281, DVU3359 | deaminase activity, ATP binding, adenyl ribonucleotide binding, adenyl nucleotide binding |
bicluster_0268 | 840 | 17000 | 0.47 | DVU0722, DVU1428, DVU2417, DVU2515, DVU3356, DVU0128, DVU0299, DVU0300, DVU0613, DVU1361, DVU1458, DVU1548, DVU1590, DVU2140, DVU2243, DVU2416, DVU2484, DVU2485, DVU2673, DVU2762, DVU3355 | carbohydrate metabolic process, transferase activity, transferring hexos... |
bicluster_0135 | 1.9 | 5000 | 0.47 | DVU0299, DVU0300, DVU0570, DVU0677, DVU1440, DVU1532, DVU1548, DVU1606, DVU2251, DVU2747, DVU2933, DVU3016, DVU0079, DVU0328, DVU0691, DVU1004, DVU2373, DVU2609, DVU2779, DVU3127, DVU3392 | cell envelope organization, Gram-negative-bacterium-type cell outer ..., membrane biogenesis, single-organism membrane organization, membrane organization |
bicluster_0273 | 0.00016 | 0.00011 | 0.47 | DVU2024, DVU2025, DVU2026, DVU2031, DVU2035, DVU2037, DVU2046, DVU2009, DVU2012, DVU2015, DVU2016, DVU2021, DVU2023, DVU2027, DVU2028, DVU2034, DVU2038, DVU2039, DVU2040, DVU2041, DVU2042, DVU2043, DVU2045, DVU2047 | vitamin metabolic process, water-soluble vitamin metabolic process, vitamin biosynthetic process, cobalamin metabolic process, cobalamin biosynthetic process |
bicluster_0181 | 570 | 13 | 0.47 | DVU0009, DVU0067, DVU0102, DVU0308, DVU0363, DVU1037, DVU1683, DVU2358, DVU2730, DVU2743, DVU2761, DVU2871, DVU3043, DVU3081, DVU3108, DVU3267, DVU0126, DVU0249, DVU0324, DVU0346, DVU0736, DVU1173, DVU1604, DVU1662, DVU1744, DVU2618, DVU2787, DVU2823, DVU3040 | antiporter activity, NADP binding, secondary active transmembrane transport... |