Regulatory Modules
Displaying 41 - 50 of 1058Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0117 | 7.2 | 130 | 0.49 | DVU0110, DVU0156, DVU0326, DVU1376, DVU1461, DVU1462, DVU1463, DVU1464, DVU1544, DVU1883, DVU2140, DVU2932, DVU3009, DVU3216, DVU0007, DVU0413, DVU0612, DVU0760, DVU2329, DVU2338, DVU2491, DVU2765, DVU2766, DVU2767, DVU3067, DVU3172 | protein complex assembly, cytochrome complex assembly, cellular macromolecular complex assembly, cellular protein complex assembly, macromolecular complex subunit organizat... |
bicluster_0232 | 0.04 | 3.5 | 0.49 | DVU0302, DVU1190, DVU1372, DVU1373, DVU1374, DVU1375, DVU1377, DVU1378, DVU2532, DVU2965, DVU0837, DVU0838, DVU0936, DVU0942, DVU0986, DVU0987, DVU1093, DVU1367, DVU1392, DVU1612, DVU1834, DVU3187 | RNA processing, ncRNA processing, ncRNA metabolic process, cell cycle, TAT protein transport complex |
bicluster_0233 | 0.00041 | 0.00000087 | 0.49 | DVU0618, DVU1477, DVU1705, DVU1706, DVU1734, DVU2180, DVU2717, DVU2718, DVU0570, DVU1427, DVU1478, DVU1480, DVU1520, DVU1521, DVU1711, DVU1745, DVU2178, DVU2709, DVUA0018, DVUA0019, DVUA0020, DVUA0026 | DNA binding, nucleic acid binding, sequence-specific DNA binding |
mex_bicluster_0295 | 1400 | 560 | 0.49 | 6829017, 6825389, 6829549, 6830063, 6827870, 6830467, RMQ10590, 6828815, 6830921, 6829314, 6826622, 6830519, RMQ06402, 6828782, 6826090, 6830908, 6830913, 6830428, 6831028, RMQ11515, 6826571, 6829571 | |
bicluster_0272 | 0.12 | 1.8 | 0.49 | DVU0129, DVU0222, DVU0690, DVU0720, DVU2443, DVU2633, DVU2799, DVU2800, DVU2801, DVU2847, DVU0629, DVU0677, DVU0722, DVU1440, DVU2180, DVU2351, DVU2747, DVU2835, DVU2933, DVU3016 | signal transducer activity, molecular transducer activity, phosphorelay sensor kinase activity, protein kinase activity, protein histidine kinase activity |
mmp-bicluster_0151 | 0.017 | 970 | 0.49 | MMP0009, MMP0063, MMP0369, MMP0598, MMP0614, MMP0886, MMP0939, MMP1056, MMP1262, MMP1343, MMP1388, MMP1525, MMP1679, MMP0090, MMP0585, MMP1179, MMP1526, RNA_47, MMP0725, MMP0769, MMP0515, RNA_23, MMP0475 | ATP-binding cassette (ABC) transporter c..., plasma membrane part, ATPase dependent transmembrane transport..., catalytic complex, transmembrane transporter complex |
bicluster_0119 | 1600 | 13000 | 0.49 | DVU0093, DVU0359, DVU0380, DVU0418, DVU1467, DVU1722, DVU2420, DVU2486, DVU2554, DVU2555, DVU2641, DVU2658, DVU2659, DVU2667, DVU0146, DVU0159, DVU0160, DVU0243, DVU0319, DVU0417, DVU0831, DVU1192, DVU2258, DVU2752, DVU2876 | DNA recombination, antiporter activity, hydrolase activity, acting on acid anhyd..., hydrolase activity, acting on acid anhyd..., carbohydrate binding |
mmp-bicluster_0049 | 1.2 | 19 | 0.49 | MMP0020, MMP0063, MMP0084, MMP0268, MMP0277, MMP0279, MMP0302, MMP0562, MMP0643, MMP0727, MMP0918, MMP1290, MMP1343, MMP1345, MMP1430, MMP1431, MMP0742, MMP1603, MMP0036, MMP0239, MMP0307, MMP0725, MMP0902, MMP1218, MMP1235, MMP1282, MMP1283, MMP1346, MMP1372, MMP1551, MMP1606, MMP1607 | ion binding, binding, ribonucleotide binding, carbohydrate derivative binding |
bicluster_0120 | 2900 | 16000 | 0.49 | DVU0370, DVU0758, DVU1278, DVU1336, DVU3346, DVU0298, DVU0421, DVU0526, DVU0590, DVU0662, DVU0664, DVU1212, DVU1213, DVU2555, DVU3345 | O-acyltransferase activity, antiporter activity, acetyltransferase activity, secondary active transmembrane transport..., hydrolase activity, acting on carbon-nit... |
bicluster_0235 | 400 | 14000 | 0.49 | DVU0753, DVU2216, DVU3116, DVU0399, DVU0503, DVU0507, DVU0508, DVU0510, DVU0809, DVU0810, DVU1247, DVU1248, DVU1298, DVU1299, DVU1300, DVU1571, DVU1622, DVU2298, DVU2299, DVU2913, DVU2914, DVU3206, DVU3307, DVU3308, DVU3310 | IMP biosynthetic process, 'de novo' IMP biosynthetic process, IMP metabolic process, purine nucleotide biosynthetic process, purine nucleoside monophosphate biosynth... |