Organism : Bacillus cereus ATCC14579 | Module List :
Regulation information for BC2737(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BC2737
|Gene||Common Name||Description||Module membership|
|BC0345||BC0345||Isochorismatase (NCBI ptt file)||299, 395|
|BC0483||BC0483||Penicillin-binding protein (NCBI ptt file)||47, 299|
|BC0637||BC0637||putative protein kinase (NCBI ptt file)||284, 299|
|BC0993||BC0993||Transcriptional regulator, PadR family (NCBI ptt file)||299, 359|
|BC1079||BC1079||hypothetical protein (NCBI ptt file)||203, 211|
|BC1338||BC1338||Oligoendopeptidase F (NCBI ptt file)||203, 395|
|BC1566||BC1566||Thermostable carboxypeptidase 1 (NCBI ptt file)||203, 299|
|BC1567||BC1567||Ribosomal-protein-alanine acetyltransferase (NCBI ptt file)||299, 395|
|BC1594||BC1594||Isochorismatase (NCBI ptt file)||203, 395|
|BC1915||BC1915||Transcriptional regulator, PBSX family (NCBI ptt file)||203, 422|
|BC2108||BC2108||RNA polymerase ECF-type sigma factor (NCBI ptt file)||98, 299|
|BC2145||BC2145||5-methylcytosine-specific restriction enzyme A (NCBI ptt file)||299, 409|
|BC2182||BC2182||Histidinol-phosphatase (NCBI ptt file)||203, 395|
|BC2183||BC2183||Acetyltransferase (NCBI ptt file)||203, 395|
|BC2190||BC2190||Penicillin-binding protein (NCBI ptt file)||225, 299|
|BC2226||BC2226||hypothetical protein (NCBI ptt file)||225, 299|
|BC2235||BC2235||hypothetical protein (NCBI ptt file)||203, 422|
|BC2265||BC2265||hypothetical protein (NCBI ptt file)||284, 299|
|BC2266||BC2266||hypothetical protein (NCBI ptt file)||220, 299|
|BC2292||BC2292||3-hydroxyisobutyryl-coenzyme A hydrolase (NCBI ptt file)||173, 203|
|BC2299||BC2299||hypothetical protein (NCBI ptt file)||299, 316|
|BC2313||BC2313||DNA-binding protein HU (NCBI ptt file)||288, 299|
|BC2332||BC2332||hypothetical protein (NCBI ptt file)||163, 299|
|BC2433||BC2433||Indole-3-pyruvate decarboxylase (NCBI ptt file)||299, 397|
|BC2482||BC2482||hypothetical Cytosolic Protein (NCBI ptt file)||163, 299|
|BC2524||BC2524||Oligoendopeptidase F (NCBI ptt file)||173, 203|
|BC2534||BC2534||hypothetical Membrane Associated Protein (NCBI ptt file)||203, 211|
|BC2603||BC2603||hypothetical protein (NCBI ptt file)||63, 299|
|BC2609||BC2609||Cytochrome P450 (NCBI ptt file)||299, 359|
|BC2658||BC2658||Serine/threonine protein kinase (NCBI ptt file)||203, 409|
|BC2679||BC2679||hypothetical protein (NCBI ptt file)||47, 299|
|BC2697||BC2697||Translation initiation inhibitor (NCBI ptt file)||203, 299|
|BC2737||BC2737||hypothetical protein (NCBI ptt file)||203, 299|
|BC2738||BC2738||Transcriptional regulator, AraC family (NCBI ptt file)||173, 203|
|BC2782||BC2782||Glutamate-rich protein grpB (NCBI ptt file)||203, 299|
|BC2829||BC2829||putative Metal-dependent phosphohydrolase (NCBI ptt file)||146, 299|
|BC3037||BC3037||Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (NCBI ptt file)||47, 299|
|BC3057||BC3057||Methyltransferase (NCBI ptt file)||173, 203|
|BC3123||BC3123||hydrolase (NCBI ptt file)||26, 299|
|BC3220||BC3220||hypothetical protein (NCBI ptt file)||299, 409|
|BC3252||BC3252||hypothetical protein (NCBI ptt file)||299, 449|
|BC3263||BC3263||hypothetical Cytosolic Protein (NCBI ptt file)||299, 496|
|BC3264||BC3264||hypothetical protein (NCBI ptt file)||264, 299|
|BC3469||BC3469||hypothetical protein (NCBI ptt file)||299, 359|
|BC3490||BC3490||Penicillin-binding protein (NCBI ptt file)||299, 449|
|BC3549||BC3549||Acetyltransferase (NCBI ptt file)||203, 211|
|BC3998||BC3998||hypothetical protein (NCBI ptt file)||26, 299|
|BC4014||BC4014||Neopullulanase (NCBI ptt file)||63, 299|
|BC4072||BC4072||RNA polymerase sigma-F factor (NCBI ptt file)||203, 420|
|BC4073||BC4073||Anti-sigma F factor (NCBI ptt file)||203, 491|
|BC4074||BC4074||Anti-sigma F factor antagonist (NCBI ptt file)||203, 409|
|BC4131||BC4131||hypothetical protein (NCBI ptt file)||63, 299|
|BC4613||BC4613||Metal-dependent hydrolase (NCBI ptt file)||203, 216|
|BC5019||BC5019||Ribosomal-protein-serine acetyltransferase (NCBI ptt file)||203, 211|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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If the gene is a member of a module, regulators influencing that module are also considered to regulate the gene. Regulators table list total number of regulatory influences, regulators, modules and type of the influence.
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- 1. All genomic elements for the organism are represented as a circle and each element is separated by black tick marks. In this example chromosome and pDV represent main chromosome and plasmid for D. vulgaris Hildenborough, respectively.
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