Organism : Clostridium acetobutylicum | Module List :
Phage related anti-repressor protein (NCBI ptt file)
Functional Annotations (1)
|Phage anti-repressor protein||cog/ cog|
Regulation information for CAC1945(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for CAC1945
|Phage anti-repressor protein||cog/ cog|
Module neighborhood information for CAC1945
|Gene||Common Name||Description||Module membership|
|CAC0261||nifV||Homocitrate synthase,alpha subunit nifV(nioA) (NCBI ptt file)||171, 220|
|CAC0370||CAC0370||Cation efflux system protein, AcrB/AcrF/AcrD family (NCBI ptt file)||171, 307|
|CAC0373||CAC0373||ABC transporter, ATP binding protein (NCBI ptt file)||171, 241|
|CAC0446||CAC0446||Hydrolase of MutT (Nudix) family (NCBI ptt file)||171, 226|
|CAC0645||CAC0645||Similar to spore germination protein (NCBI ptt file)||171, 220|
|CAC1862||CAC1862||Hypothetical protein (NCBI ptt file)||171, 307|
|CAC1872||repB||Replication initiation protein REP (NCBI ptt file)||54, 342|
|CAC1895||CAC1895||Phage terminase-like protein, large subunit (NCBI ptt file)||54, 332|
|CAC1900||CAC1900||Phage regulatory Com-like protein, containing Zn-finger (NCBI ptt file)||54, 171|
|CAC1901||CAC1901||Hypothetical protein (NCBI ptt file)||54, 342|
|CAC1905||CAC1905||Hypothetical protein (NCBI ptt file)||121, 171|
|CAC1915||CAC1915||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1916||CAC1916||Hypothetical protein (NCBI ptt file)||54, 332|
|CAC1917||CAC1917||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1918||CAC1918||Hypothetical protein (NCBI ptt file)||54, 332|
|CAC1920||CAC1920||Zn-finger containing protein (NCBI ptt file)||54, 246|
|CAC1921||CAC1921||Hypothetical protein (NCBI ptt file)||54, 117|
|CAC1923||CAC1923||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1928||CAC1928||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1931||CAC1931||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1934||CAC1934||Hypothetical protein (NCBI ptt file)||54, 284|
|CAC1937||CAC1937||Hypothetical protein (NCBI ptt file)||54, 284|
|CAC1938||CAC1938||Predicted HD superfamily hydrolase (NCBI ptt file)||54, 284|
|CAC1939||CAC1939||Hypothetical protein (NCBI ptt file)||54, 366|
|CAC1942||CAC1942||Hypothetical protein (NCBI ptt file)||54, 342|
|CAC1944||CAC1944||Hypothetical protein (NCBI ptt file)||54, 332|
|CAC1945||CAC1945||Phage related anti-repressor protein (NCBI ptt file)||54, 171|
|CAC2100||CAC2100||Hypothetical protein (NCBI ptt file)||54, 282|
|CAC2101||CAC2101||Hypothetical protein (NCBI ptt file)||54, 333|
|CAC2102||CAC2102||Prepilin peptidase (NCBI ptt file)||54, 312|
|CAC2103||CAC2103||General secretion pathway protein, pilin family (NCBI ptt file)||54, 320|
|CAC2104||CAC2104||General secretion pathway protein F (NCBI ptt file)||54, 282|
|CAC2106||CAC2106||Predicted membrane protein (NCBI ptt file)||54, 282|
|CAC2534||CAC2534||HD_GYP hydrolase domain fused to HD hydrolase domain (NCBI ptt file)||171, 220|
|CAC2618||CAC2618||Hypothetical protein, CF-17 family (NCBI ptt file)||171, 220|
|CAC3358||CAC3358||Site-specific DNA methylase dam (NCBI ptt file)||125, 171|
|CAC3367||CAC3367||Protein distantly similar to N-terminal fragment of HSP60 chaperonin family (NCBI ptt file)||125, 171|
|CAC3462||fabG||3-oxoacyl-acyl carrier protein reductase (NCBI ptt file)||171, 220|
|CAC3513||CAC3513||Hypothetical protein (NCBI ptt file)||171, 220|
|CAC3564||aspC||aspartyl-tRNA synthetase (RefSeq)||171, 220|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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