Organism : Clostridium acetobutylicum | Module List :
Regulation information for CAC2106(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for CAC2106
|Gene||Common Name||Description||Module membership|
|CAC0366||CAC0366||Predicted permease (NCBI ptt file)||113, 282|
|CAC0374||CAC0374||Similar to ABC transporter (permease) (NCBI ptt file)||85, 282|
|CAC0379||CAC0379||Transcriptional regulator, GntR family (NCBI ptt file)||282, 286|
|CAC0508||uvrC||Excinuclease ABC subunit C (NCBI ptt file)||35, 282|
|CAC0522||CAC0522||Predicted hydrolase of the HAD superfamily (NCBI ptt file)||66, 282|
|CAC0640||CAC0640||Predicted phoshohydrolase (NCBI ptt file)||282, 298|
|CAC0676||pssA||Phosphatidylserine synthase (NCBI ptt file)||149, 282|
|CAC1011||CAC1011||Uncharacterized small membrane protein, homolog of ykvA B.subtilis (NCBI ptt file)||282, 309|
|CAC1070||CAC1070||Transcriptional regulator, AcrR family (NCBI ptt file)||183, 282|
|CAC1407||CAC1407||PTS system, beta-glucosides-specific IIABC component (NCBI ptt file)||282, 359|
|CAC1593||CAC1593||Zn-binding lipoprotein related (surface adhesin A), ADHS (NCBI ptt file)||69, 282|
|CAC1659||CAC1659||Predicted membrane protein (NCBI ptt file)||270, 282|
|CAC1777||CAC1777||Nudix (MutT-like) hydrolase (NCBI ptt file)||282, 306|
|CAC1779||CAC1779||Hypothetical protein (NCBI ptt file)||183, 282|
|CAC1781||CAC1781||Predicted nucleotidyltransferase (NCBI ptt file)||282, 306|
|CAC1791||CAC1791||Undecaprenyl pyrophosphate synthase (NCBI ptt file)||282, 345|
|CAC1792||cdsA||CDP-diglyceride synthetase (NCBI ptt file)||282, 352|
|CAC1872||repB||Replication initiation protein REP (NCBI ptt file)||54, 342|
|CAC1895||CAC1895||Phage terminase-like protein, large subunit (NCBI ptt file)||54, 332|
|CAC1900||CAC1900||Phage regulatory Com-like protein, containing Zn-finger (NCBI ptt file)||54, 171|
|CAC1901||CAC1901||Hypothetical protein (NCBI ptt file)||54, 342|
|CAC1915||CAC1915||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1916||CAC1916||Hypothetical protein (NCBI ptt file)||54, 332|
|CAC1917||CAC1917||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1918||CAC1918||Hypothetical protein (NCBI ptt file)||54, 332|
|CAC1920||CAC1920||Zn-finger containing protein (NCBI ptt file)||54, 246|
|CAC1921||CAC1921||Hypothetical protein (NCBI ptt file)||54, 117|
|CAC1923||CAC1923||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1928||CAC1928||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1931||CAC1931||Hypothetical protein (NCBI ptt file)||54, 175|
|CAC1934||CAC1934||Hypothetical protein (NCBI ptt file)||54, 284|
|CAC1937||CAC1937||Hypothetical protein (NCBI ptt file)||54, 284|
|CAC1938||CAC1938||Predicted HD superfamily hydrolase (NCBI ptt file)||54, 284|
|CAC1939||CAC1939||Hypothetical protein (NCBI ptt file)||54, 366|
|CAC1942||CAC1942||Hypothetical protein (NCBI ptt file)||54, 342|
|CAC1944||CAC1944||Hypothetical protein (NCBI ptt file)||54, 332|
|CAC1945||CAC1945||Phage related anti-repressor protein (NCBI ptt file)||54, 171|
|CAC2022||moaB||Molybdopterin biosynthesis enzyme, moaB (NCBI ptt file)||209, 282|
|CAC2025||CAC2025||Hypothetical protein (NCBI ptt file)||209, 282|
|CAC2100||CAC2100||Hypothetical protein (NCBI ptt file)||54, 282|
|CAC2101||CAC2101||Hypothetical protein (NCBI ptt file)||54, 333|
|CAC2102||CAC2102||Prepilin peptidase (NCBI ptt file)||54, 312|
|CAC2103||CAC2103||General secretion pathway protein, pilin family (NCBI ptt file)||54, 320|
|CAC2104||CAC2104||General secretion pathway protein F (NCBI ptt file)||54, 282|
|CAC2106||CAC2106||Predicted membrane protein (NCBI ptt file)||54, 282|
|CAC2170||CAC2170||Predicted membrane protein (NCBI ptt file)||282, 283|
|CAC2226||CAC2226||Enzyme of ILVE/PABC family (branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase) (NCBI ptt file)||282, 328|
|CAC2292||CAC2292||Predicted membrane protein (NCBI ptt file)||282, 359|
|CAC2410||recX||Uncharacterized protein recX (NCBI ptt file)||282, 283|
|CAC2442||CAC2442||Hemin permease (NCBI ptt file)||85, 282|
|CAC2443||CAC2443||Iron (III) ABC transporter, ATPase component (NCBI ptt file)||183, 282|
|CAC2444||CAC2444||Predicted metal-binding protein (NCBI ptt file)||85, 282|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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If the gene is a member of a module, regulators influencing that module are also considered to regulate the gene. Regulators table list total number of regulatory influences, regulators, modules and type of the influence.
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