Organism : Clostridium acetobutylicum | Module List :
Hypothetical protein, CF-27 family (NCBI ptt file)
Functional Annotations (1)
Regulation information for CAC3592(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for CAC3592
Module neighborhood information for CAC3592
|Gene||Common Name||Description||Module membership|
|CAC0095||hemA||Glutamil-tRNA reductase (NCBI ptt file)||92, 191|
|CAC0096||hemW||Precorrin-2 dehydrogenase (NCBI ptt file)||92, 191|
|CAC0097||hemC||Hydroxymrthylbilane syntase (porphobilinogen deaminase) (NCBI ptt file)||92, 191|
|CAC0098||hemD||Uroporphyrinogen III syntase (NCBI ptt file)||92, 191|
|CAC0099||hemL||Glutamate-1-semialdehyde aminotransferase (NCBI ptt file)||92, 191|
|CAC0100||hemB||Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (NCBI ptt file)||92, 191|
|CAC0145||CAC0145||N-terminal Zn-ribbon domain and C-terminal MutT domain, YJAD ortholog (NCBI ptt file)||92, 108|
|CAC0333||CAC0333||Hypothetical protein, CF-7 family (NCBI ptt file)||85, 92|
|CAC0334||CAC0334||Hypothetical protein, CF-21 family (NCBI ptt file)||1, 92|
|CAC0425||sacA||Sucrase-6-phosphate hydrolase (gene sacA) (NCBI ptt file)||92, 360|
|CAC0459||CAC0459||NtrC family transcriptional regulator (PAS and AAA domains) (NCBI ptt file)||92, 152|
|CAC0815||CAC0815||Methyl-accepting chemotaxis protein (NCBI ptt file)||134, 209|
|CAC0816||CAC0816||Lipase-esterase related protein (NCBI ptt file)||176, 209|
|CAC0869||CAC0869||Thioredoxine reductase (NCBI ptt file)||31, 209|
|CAC0982||CAC0982||Hypothetical protein (NCBI ptt file)||209, 266|
|CAC1492||CAC1492||Uncharacterized protein, YhhW/pirin family (NCBI ptt file)||92, 108|
|CAC1589||malS||Malic enzyme (NCBI ptt file)||92, 183|
|CAC1596||malS||Malic enzyme (NCBI ptt file)||85, 92|
|CAC1669||CstA||Carbon starvation protein (NCBI ptt file)||209, 238|
|CAC1690||pilT||PilT ATPase involved in pili biogenesis (NCBI ptt file)||92, 217|
|CAC1764||CAC1764||Predicted glutamine amidotransferase (NCBI ptt file)||31, 209|
|CAC1815||recA||RECA recombinase, ATPase (NCBI ptt file)||92, 233|
|CAC1854||CAC1854||Nudix (MutT) family hydrolase (NCBI ptt file)||209, 277|
|CAC2004||CAC2004||Siderophore/Surfactin synthetase related protein (NCBI ptt file)||60, 209|
|CAC2007||CAC2007||Predicted glycosyltransferase (NCBI ptt file)||97, 209|
|CAC2011||fabH||Possible 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file)||97, 209|
|CAC2016||fadB||Enoyl-CoA hydratase (NCBI ptt file)||97, 209|
|CAC2017||CAC2017||Acyl carrier protein (NCBI ptt file)||134, 209|
|CAC2018||CAC2018||Aldehyde:ferredoxin oxidoreductase (NCBI ptt file)||134, 209|
|CAC2021||moeA||Molybdopterin biosynthesis enzyme, MoeA (short form) (NCBI ptt file)||133, 209|
|CAC2022||moaB||Molybdopterin biosynthesis enzyme, moaB (NCBI ptt file)||209, 282|
|CAC2025||CAC2025||Hypothetical protein (NCBI ptt file)||209, 282|
|CAC2182||CAC2182||Hypothetical protein (NCBI ptt file)||209, 348|
|CAC2446||CAC2446||Hypothetical protein (NCBI ptt file)||27, 209|
|CAC2549||CAC2549||Uncharacterized conserved protein (NCBI ptt file)||92, 348|
|CAC2624||dapF||Diaminopimelate epimerase (NCBI ptt file)||85, 92|
|CAC2829||CAC2829||Predicted membrane protein (NCBI ptt file)||85, 92|
|CAC2830||CAC2830||Acylphosphatases, ACYP (NCBI ptt file)||70, 92|
|CAC2933||CAC2933||Ferredoxin-like domain fused to nitroreductase-like domain (NCBI ptt file)||9, 92|
|CAC3000||CAC3000||Hypothetical protein (NCBI ptt file)||92, 223|
|CAC3037||ccpA||Catabolite control protein, LacI family transcriptional regulator (NCBI ptt file)||11, 209|
|CAC3250||CAC3250||Possible glutamate racemase (NCBI ptt file)||10, 92|
|CAC3279||CAC3279||Possible surface protein, responsible for cell interaction; contains cell adhesion domain and ChW-repeats (NCBI ptt file)||209, 261|
|CAC3290||CAC3290||Iron-regulated ABC-type transporter membrane component (SufB) (NCBI ptt file)||201, 209|
|CAC3291||CAC3291||Selenocysteine lyase, NifS family (NCBI ptt file)||209, 296|
|CAC3292||CAC3292||NifU homolog involved in Fe-S cluster formation (NCBI ptt file)||209, 277|
|CAC3364||CAC3364||Barstar-like protein, ribonuclease (barnase) inhibitor (NCBI ptt file)||92, 346|
|CAC3365||CAC3365||Hypothetical protein (NCBI ptt file)||10, 92|
|CAC3366||CAC3366||Hypothetical protein (NCBI ptt file)||10, 92|
|CAC3592||CAC3592||Hypothetical protein, CF-27 family (NCBI ptt file)||92, 209|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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